BLASTX nr result

ID: Scutellaria22_contig00037900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037900
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241...    60   2e-07
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]    60   2e-07
ref|XP_003608039.1| La-related protein [Medicago truncatula] gi|...    59   3e-07
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...    59   4e-07

>ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
           gi|297741333|emb|CBI32464.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
 Frame = -2

Query: 258 SEFDSCFDDDGLNH---YDDGSRLSNSE----NEADETVSSLKRSWSKNRGKAKQRPQLQ 100
           SEFD   D++   H    +D S  +N+E    + A+E  S  K+ W++ RGK + R Q+ 
Sbjct: 296 SEFDGIMDEEEGPHPEFSEDSSHPNNTELVIESNAEENSSGSKKGWARGRGKPRGRTQIT 355

Query: 99  STRSL--PTQSSHLTN---SCPGQPIKGPRMPDGTRGF 1
           S R L  P+  S  +N   +   Q  KGPRMPDGTRGF
Sbjct: 356 SGRGLLAPSPQSSGSNQFEASAKQITKGPRMPDGTRGF 393


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
 Frame = -2

Query: 258 SEFDSCFDDDGLNH---YDDGSRLSNSE----NEADETVSSLKRSWSKNRGKAKQRPQLQ 100
           SEFD   D++   H    +D S  +N+E    + A+E  S  K+ W++ RGK + R Q+ 
Sbjct: 280 SEFDGIMDEEEGPHPEFSEDSSHPNNTELVIESNAEENSSGSKKGWARGRGKPRGRTQIT 339

Query: 99  STRSL--PTQSSHLTN---SCPGQPIKGPRMPDGTRGF 1
           S R L  P+  S  +N   +   Q  KGPRMPDGTRGF
Sbjct: 340 SGRGLLAPSPQSSGSNQFEASAKQITKGPRMPDGTRGF 377


>ref|XP_003608039.1| La-related protein [Medicago truncatula]
           gi|355509094|gb|AES90236.1| La-related protein [Medicago
           truncatula]
          Length = 442

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
 Frame = -2

Query: 258 SEFDSCFDDDGLNHYD---DGSRLSNSE----NEADETVSSLKRSWSKNRGKAKQRPQLQ 100
           SEFD   DDD   H +   D S  +N+E    +  DET    K+ W++ RGK + R Q  
Sbjct: 329 SEFDGYLDDDENLHSETAEDSSHPNNTELCVESNGDETSVGSKKGWTRGRGKGRGRTQNH 388

Query: 99  STRSL-----PTQSSHLTNSCPGQPIKGPRMPDGTRGF 1
           + R L     P+ S  L         KGPRMPDGTRGF
Sbjct: 389 TGRGLLAPPSPSSSVVLGEVSTKPNAKGPRMPDGTRGF 426


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
 Frame = -2

Query: 258 SEFDSCFDDDGL---NHYDDGSRLSN----SENEADETVSSLKRSWSKNRGKAKQRPQLQ 100
           SEF+   DD+ L      +D S+++N    +E+  +E   S K+ W+K RGK + R Q  
Sbjct: 324 SEFEGLLDDEDLALPESNEDSSQVNNVESVTESNTEENSGSSKKGWAKGRGKGRGRGQSH 383

Query: 99  STRSL--PTQSSHLTNSCPG---QPIKGPRMPDGTRGF 1
             R L  P+  S  +  C        KGPRMPDGTRGF
Sbjct: 384 GGRGLLAPSPQSVSSPQCEASAKHTSKGPRMPDGTRGF 421


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