BLASTX nr result

ID: Scutellaria22_contig00037825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037825
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31948.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    75   4e-12
ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyra...    75   7e-12
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...    75   7e-12
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 18/110 (16%)
 Frame = +2

Query: 35  EMASESESFDQNQSSSF---------RGIQIFIPFILGFNPTNPPQGTQ---------PE 160
           EMASESE+   + S+SF         R + +FIPFILGF  T   Q +          P 
Sbjct: 114 EMASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPT 173

Query: 161 ARHRVIIINPVAQSMLIMESSGGLESLFRDLSSDKSGLRPASKASIDAMP 310
            R R+I+INP  Q M+++E +   +SL R+L+S K G  PA+KASI+AMP
Sbjct: 174 PRDRIILINPFTQGMIVIEGNSSFDSLLRELAS-KGGQPPATKASIEAMP 222


>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 233

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
 Frame = +2

Query: 38  MASESESFDQNQSSSF---------RGIQIFIPFILGFNPTNPPQGTQ---------PEA 163
           MASESE+   + S+SF         R + +FIPFILGF  T   Q +          P  
Sbjct: 1   MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60

Query: 164 RHRVIIINPVAQSMLIMESSGGLESLFRDLSSDKSGLRPASKASIDAMP 310
           R R+I+INP  Q M+++E +   +SL R+L+S K G  PA+KASI+AMP
Sbjct: 61  RDRIILINPFTQGMIVIEGNSSFDSLLRELAS-KGGQPPATKASIEAMP 108


>ref|XP_002890641.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336483|gb|EFH66900.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 11/102 (10%)
 Frame = +2

Query: 38  MASESESFDQNQSSSFRG-------IQIFIPFILGFNPTNPPQGTQPE---ARHRVIIIN 187
           MA+E E+    ++SS  G       + +F+PF+LGF+   P  G   +   +R R+I++N
Sbjct: 1   MATEQEAEVGTETSSTSGRFLRNRDLYLFLPFLLGFSDQEPSNGDDDDVASSRERIILVN 60

Query: 188 PVAQSMLIMESSGGLESLFRD-LSSDKSGLRPASKASIDAMP 310
           P  Q M+++E S G+  L RD L S + G  PASKASIDAMP
Sbjct: 61  PFTQGMIVLEGSSGMNPLLRDILESREEGRPPASKASIDAMP 102


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 16/107 (14%)
 Frame = +2

Query: 38  MASESESFDQNQSSSF------RGIQIFIPFILGFNPTNP----------PQGTQPEARH 169
           MASE+E F    SS F      R + +F+PFILGF  TN           PQ T P    
Sbjct: 1   MASETE-FPAEFSSMFERLLRHRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPN--E 57

Query: 170 RVIIINPVAQSMLIMESSGGLESLFRDLSSDKSGLRPASKASIDAMP 310
           R+I+INP  Q M+++E +  LESL RD+  +K G  PASKASI+AMP
Sbjct: 58  RIILINPFTQGMVVIEGAASLESLLRDI-GNKKGQPPASKASIEAMP 103


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 15/106 (14%)
 Frame = +2

Query: 38  MASESESFDQNQSSSF------RGIQIFIPFILGFNPTNP---------PQGTQPEARHR 172
           MASE+E      SS F      R + +F+PFI GF  TN          PQ T P    R
Sbjct: 1   MASETE-LPAELSSMFERLLRHRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPN--ER 57

Query: 173 VIIINPVAQSMLIMESSGGLESLFRDLSSDKSGLRPASKASIDAMP 310
           +I+INP+ Q M+++E +  LESL RD+  +K+G  PASKASI+AMP
Sbjct: 58  IILINPLTQGMVVIEGAASLESLLRDI-GNKNGQPPASKASIEAMP 102


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