BLASTX nr result

ID: Scutellaria22_contig00037675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037675
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...    99   4e-19
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                       98   8e-19
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...    98   8e-19
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...    95   5e-18

>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/76 (56%), Positives = 61/76 (80%)
 Frame = +3

Query: 12  VLPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEA 191
           V PN++T+S++INALC++NR++E R+LL QL    D+ P PF+YNP+IDGFCK+G+V+EA
Sbjct: 370 VSPNIYTYSVIINALCKDNRIHEARDLLRQLKC-SDVFPKPFIYNPVIDGFCKAGNVDEA 428

Query: 192 NAIFSKMEVKGCIHDK 239
           N I ++ME K C  DK
Sbjct: 429 NVIVTEMEEKRCRPDK 444


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = +3

Query: 12  VLPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEA 191
           + PN FT+SILINALC ENRL + R LL QL+ + DIIP PF+YNP+IDGFCK+G V EA
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEA 436

Query: 192 NAIFSKMEVKGCIHDK 239
           N I  +ME K C  DK
Sbjct: 437 NVIVEEMEKKKCKPDK 452


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42570711|ref|NP_973429.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
           [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330250896|gb|AEC05990.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330250897|gb|AEC05991.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = +3

Query: 12  VLPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEA 191
           + PN FT+SILINALC ENRL + R LL QL+ + DIIP PF+YNP+IDGFCK+G V EA
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEA 436

Query: 192 NAIFSKMEVKGCIHDK 239
           N I  +ME K C  DK
Sbjct: 437 NVIVEEMEKKKCKPDK 452


>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +3

Query: 12  VLPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEA 191
           V P V+T+++LINALC+ENRLNE R+ L Q+     IIP PF+YNP+IDGFCK+G+V+E 
Sbjct: 350 VSPTVYTYAVLINALCKENRLNEARDFLGQIK-NSSIIPKPFMYNPVIDGFCKAGNVDEG 408

Query: 192 NAIFSKMEVKGCIHDK 239
           N I  +ME K C  DK
Sbjct: 409 NVILKEMEEKRCDPDK 424



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = +3

Query: 15  LPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEAN 194
           LP+V T++ LIN LC+ N +  G  L  ++  R D  P    Y  II GFCKSG ++EA+
Sbjct: 210 LPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEAS 269

Query: 195 AIFSKMEVKG 224
            +F +M   G
Sbjct: 270 NLFEEMMRSG 279


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331650|gb|EFH62069.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 536

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/76 (61%), Positives = 57/76 (75%)
 Frame = +3

Query: 12  VLPNVFTFSILINALCRENRLNEGRNLLWQLSLREDIIPPPFVYNPIIDGFCKSGDVEEA 191
           + PN FT+SILINALC+ENRL + R LL QL+ + DIIP PF+YNP+IDGFCK+G V EA
Sbjct: 378 MFPNAFTYSILINALCKENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVNEA 436

Query: 192 NAIFSKMEVKGCIHDK 239
             I  +ME K C  DK
Sbjct: 437 IVIVEEMEKKKCKPDK 452


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