BLASTX nr result

ID: Scutellaria22_contig00037427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00037427
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   124   1e-45
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              124   1e-45
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   124   1e-45
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   117   7e-44
ref|XP_002328182.1| chromatin remodeling complex subunit [Populu...   121   4e-42

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  124 bits (310), Expect(2) = 1e-45
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +2

Query: 2   SISDNDLDNIVGVSDRSELEEMEPPSTLLCELRPYQKQALNWMIQLERGHCVDEAAATLH 181
           SISD DLDNIVG+ D S LEE +PPSTL CELRPYQ+QAL+WMIQLE+G C+DEA  TLH
Sbjct: 316 SISDTDLDNIVGIGDNSYLEERDPPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLH 375

Query: 182 PCWDAYRLADR 214
           PCWDAYRLAD+
Sbjct: 376 PCWDAYRLADK 386



 Score = 84.3 bits (207), Expect(2) = 1e-45
 Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +3

Query: 213 GDATIEFPSTLQMARGGILADSMGLGKTIMAISLLLSHSERXXXXXXXXXXXXXXXXXEA 392
           GDAT EFPSTL+MARGGILAD+MGLGKTIM I+LLL+HSE+                 E 
Sbjct: 398 GDATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEI 457

Query: 393 S--SDKFPILQKKTSKFSGF 446
           S  SD+ P L KK +KFSGF
Sbjct: 458 SSISDQSPDLSKKAAKFSGF 477


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  124 bits (310), Expect(2) = 1e-45
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +2

Query: 2   SISDNDLDNIVGVSDRSELEEMEPPSTLLCELRPYQKQALNWMIQLERGHCVDEAAATLH 181
           SISD DLDNIVG+ D S LEE +PPSTL CELRPYQ+QAL+WMIQLE+G C+DEA  TLH
Sbjct: 312 SISDTDLDNIVGIGDNSYLEERDPPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLH 371

Query: 182 PCWDAYRLADR 214
           PCWDAYRLAD+
Sbjct: 372 PCWDAYRLADK 382



 Score = 84.3 bits (207), Expect(2) = 1e-45
 Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +3

Query: 213 GDATIEFPSTLQMARGGILADSMGLGKTIMAISLLLSHSERXXXXXXXXXXXXXXXXXEA 392
           GDAT EFPSTL+MARGGILAD+MGLGKTIM I+LLL+HSE+                 E 
Sbjct: 394 GDATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEI 453

Query: 393 S--SDKFPILQKKTSKFSGF 446
           S  SD+ P L KK +KFSGF
Sbjct: 454 SSISDQSPDLSKKAAKFSGF 473


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  124 bits (310), Expect(2) = 1e-45
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +2

Query: 2   SISDNDLDNIVGVSDRSELEEMEPPSTLLCELRPYQKQALNWMIQLERGHCVDEAAATLH 181
           SISD DLDNIVG+ D S LEE +PPSTL CELRPYQ+QAL+WMIQLE+G C+DEA  TLH
Sbjct: 303 SISDTDLDNIVGIGDNSYLEERDPPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLH 362

Query: 182 PCWDAYRLADR 214
           PCWDAYRLAD+
Sbjct: 363 PCWDAYRLADK 373



 Score = 84.3 bits (207), Expect(2) = 1e-45
 Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +3

Query: 213 GDATIEFPSTLQMARGGILADSMGLGKTIMAISLLLSHSERXXXXXXXXXXXXXXXXXEA 392
           GDAT EFPSTL+MARGGILAD+MGLGKTIM I+LLL+HSE+                 E 
Sbjct: 385 GDATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEI 444

Query: 393 S--SDKFPILQKKTSKFSGF 446
           S  SD+ P L KK +KFSGF
Sbjct: 445 SSISDQSPDLSKKAAKFSGF 464


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1028

 Score =  117 bits (293), Expect(2) = 7e-44
 Identities = 54/71 (76%), Positives = 58/71 (81%)
 Frame = +2

Query: 2   SISDNDLDNIVGVSDRSELEEMEPPSTLLCELRPYQKQALNWMIQLERGHCVDEAAATLH 181
           SISD DLDNIVGV D SELEEM+PPSTL CELRPYQKQAL WM QLE+G   DE A  LH
Sbjct: 315 SISDTDLDNIVGVRDSSELEEMDPPSTLQCELRPYQKQALQWMYQLEKGKYTDEGATALH 374

Query: 182 PCWDAYRLADR 214
           PCW+AY LAD+
Sbjct: 375 PCWEAYHLADQ 385



 Score = 85.1 bits (209), Expect(2) = 7e-44
 Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = +3

Query: 213 GDATIEFPSTLQMARGGILADSMGLGKTIMAISLLLSHSERXXXXXXXXXXXXXXXXXEA 392
           GDAT+EFPSTLQMARGGILADSMGLGKTIM ISLLL+HSER                 + 
Sbjct: 397 GDATVEFPSTLQMARGGILADSMGLGKTIMTISLLLAHSERGGTSSTQFMSQLSTENSDV 456

Query: 393 --SSDKFPILQKKTSKFSGF 446
             +SD+ P   K T +FSGF
Sbjct: 457 NDTSDQLPNPPKNTKRFSGF 476


>ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837697|gb|EEE76062.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 896

 Score =  121 bits (304), Expect(2) = 4e-42
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +2

Query: 2   SISDNDLDNIVGVSDRSELEEMEPPSTLLCELRPYQKQALNWMIQLERGHCVDEAAATLH 181
           SISD DL+NIVG  D SELEEM+PPSTL CELRPYQKQAL+WMI LE+G C+DEAA TLH
Sbjct: 216 SISDADLENIVGGGDSSELEEMDPPSTLQCELRPYQKQALHWMIHLEKGKCMDEAATTLH 275

Query: 182 PCWDAYRLADR 214
           PCW+AY LAD+
Sbjct: 276 PCWEAYHLADK 286



 Score = 75.1 bits (183), Expect(2) = 4e-42
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +3

Query: 213 GDATIEFPSTLQMARGGILADSMGLGKTIMAISLLLSHSER 335
           GDATIEFPSTLQMARGGILAD+MGLGKTIM ISLLL+HS++
Sbjct: 298 GDATIEFPSTLQMARGGILADAMGLGKTIMTISLLLTHSDK 338


Top