BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036470
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    85   7e-15
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    84   9e-15
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...    82   4e-14
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...    82   6e-14
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...    81   8e-14

>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
 Frame = +1

Query: 10   IQMIVGGLGEGISNRARKASLRRAQNHHSIPELEVGELNIKANISFGPADETTLLQPHSD 189
            I  I GG   G+ ++ ++ +  R  NH          +  K  ISFGP D   +L PH D
Sbjct: 694  INAITGGSSLGVESKRQRKAYVRQVNHVGTSYQSNPPVYSKTVISFGPEDAEGILFPHQD 753

Query: 190  ALVVTAEVGGYDVARIFVDTGSSADIIFHDCFVKMN------TNAPIRPVTTALYGFTGG 351
             LVV+ E+   +V R+ +D GSSAD++F+D F KM       TNA +      L GF G 
Sbjct: 754  PLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGV-----PLQGFGGQ 808

Query: 352  AVFPIGMVSLQVVLG 396
             V  IG +SLQVV G
Sbjct: 809  QVHAIGKISLQVVFG 823


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
 Frame = +1

Query: 10   IQMIVGGLGEGISNRARKASLRRAQNHHSIPELEVGELNIKANISFGPADETTLLQPHSD 189
            I  I GG   G+ ++ ++ +  R  NH          +  K  ISFGP D   +L PH D
Sbjct: 694  INAITGGSSLGVESKRQRKAYVRQVNHVGTIYQSKPPVYSKTVISFGPEDAEGILFPHQD 753

Query: 190  ALVVTAEVGGYDVARIFVDTGSSADIIFHDCFVKMN------TNAPIRPVTTALYGFTGG 351
             LVV+ E+   +V R+ +D GSSAD++F+D F KM       TNA +      L GF G 
Sbjct: 754  PLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGV-----PLQGFGGQ 808

Query: 352  AVFPIGMVSLQVVLG 396
             V  IG +SLQVV G
Sbjct: 809  QVHAIGKISLQVVFG 823


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +1

Query: 10  IQMIVGGLGEGISNRARKASLRRAQNHHSIPELEVGELNIKANISFGPADETTLLQPHSD 189
           I  I GG   G+ ++ ++ +  R  NH       +        ISFGP D   +L PH D
Sbjct: 45  INAITGGSSLGVESKRQRKAYVRQINHVGTSYQSIPPAYSNTVISFGPEDAEGILFPHQD 104

Query: 190 ALVVTAEVGGYDVARIFVDTGSSADIIFHDCFVKMNTNAPIRPVTTA---LYGFTGGAVF 360
            LV++ E+   +V R+ VD GSSAD++F+D F KM    P   +T A   L GF G  V 
Sbjct: 105 PLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKM--QIPEDRLTHAGIPLQGFGGQQVH 162

Query: 361 PIGMVSLQVVLG 396
            IG +SLQVV G
Sbjct: 163 AIGKISLQVVFG 174


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
 Frame = +1

Query: 10  IQMIVGGLGEGISNRARKASLRRAQNHHSIPELEVGELNIKANISFGPADETTLLQPHSD 189
           I  I GG   G+ ++ ++ +  R  +H       V        ISFGP D   +L PH D
Sbjct: 211 INAITGGSSLGVESKRQRKAYVRQIHHVGTSYQSVPPAYSNTVISFGPEDAEGILFPHQD 270

Query: 190 ALVVTAEVGGYDVARIFVDTGSSADIIFHDCFVKMNTNAPIRPVTTA---LYGFTGGAVF 360
            LV++ E+   +V R+ VD GSSAD++F+D F KM    P   +T A   L GF G  V 
Sbjct: 271 PLVISVEIAQCEVQRVLVDGGSSADVLFYDAFKKM--QIPEDRLTHAGIPLQGFGGHQVH 328

Query: 361 PIGMVSLQVVLG 396
            IG +SLQVV G
Sbjct: 329 TIGKISLQVVFG 340


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +1

Query: 43   ISNRARKASLRRAQNHHSIPELEVGELN-IKANISFGPADETTLLQPHSDALVVTAEVGG 219
            +S R RK  +R     HSI     G    +   ISFGP D   +L PH D LV++AE+ G
Sbjct: 653  LSKRQRKMQIRMV---HSITSAGEGAPQYVNQLISFGPEDAEGVLFPHQDPLVISAEIAG 709

Query: 220  YDVARIFVDTGSSADIIFHDCFVKMN-TNAPIRPVTTALYGFTGGAVFPIGMVSLQVVLG 396
            ++V RI VD GSSAD+IF + + KM      + P  T+L GF G AV  +G   L +  G
Sbjct: 710  FEVRRILVDGGSSADVIFAEAYAKMGLPTQTLAPAPTSLRGFGGEAVQVLGQALLLIAFG 769