BLASTX nr result

ID: Scutellaria22_contig00036452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036452
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    69   3e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    67   1e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    67   1e-09
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    67   2e-09
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    65   4e-09

>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/85 (45%), Positives = 48/85 (56%)
 Frame = -3

Query: 263 LGHASIGVLEHLDFLKNLCTPESISAIKSCSSCQKGKFHRFRFQDSHIHSTSIFDLIHVD 84
           LGH S GVL  L F +   +   +  IKSC  C + K  R  F  S   +T  F+LIH D
Sbjct: 509 LGHPSTGVL--LSFPEFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELIHCD 566

Query: 83  VWGPCKEDSITNTSYFLTIVDDFSR 9
           VWGP +  +   + YFLTIVDDFSR
Sbjct: 567 VWGPYRTPASCGSVYFLTIVDDFSR 591


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/86 (47%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -3

Query: 263 LGHASIGVLEHLD-FLKNLCTPESISAIKSCSSCQKGKFHRFRFQDSHIHSTSIFDLIHV 87
           LGH S  VL  L  F  + C+  S    +SC  C + K  R  F DS   ST  F LIH 
Sbjct: 517 LGHPSFSVLSSLPLFSGSSCSVSS----RSCDVCFRAKQTREVFPDSSNKSTDCFSLIHC 572

Query: 86  DVWGPCKEDSITNTSYFLTIVDDFSR 9
           DVWGP +  S     YFLTIVDDFSR
Sbjct: 573 DVWGPYRVPSSCGAVYFLTIVDDFSR 598


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/86 (47%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -3

Query: 263 LGHASIGVLEHLD-FLKNLCTPESISAIKSCSSCQKGKFHRFRFQDSHIHSTSIFDLIHV 87
           LGH S  VL  L  F  + C+  S    +SC  C + K  R  F DS   ST  F LIH 
Sbjct: 517 LGHPSFSVLSSLPLFSGSSCSVSS----RSCDVCFRAKQTREVFPDSSNKSTDCFSLIHC 572

Query: 86  DVWGPCKEDSITNTSYFLTIVDDFSR 9
           DVWGP +  S     YFLTIVDDFSR
Sbjct: 573 DVWGPYRVPSSCGAVYFLTIVDDFSR 598


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 LGHASIGVLEH--LDFLKNLCTPESISAIKSCSSCQKGKFHRFRFQDSHIHSTSIFDLIH 90
           L H+ +G + H  L F+       SI     C  C   K HR  F  S I S   FDLIH
Sbjct: 547 LWHSRLGHVSHSRLSFIAKNFLNFSIQFNNDCPICLLAKQHRLPFGTSEISSEKPFDLIH 606

Query: 89  VDVWGPCKEDSITNTSYFLTIVDDFSRGT 3
            D+WG  K  S++   YFLTIVDD++R T
Sbjct: 607 CDIWGRYKHSSLSGAHYFLTIVDDYTRFT 635


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
 Frame = -3

Query: 263 LGHASIGVLEHLDFLKNLCTPESISAIKS--CSSCQKGKFHRFRFQDSHIHSTSIFDLIH 90
           LGH S  VL  +  L N      +  I+   C SC +GK  R  FQ S+  +  IF+LIH
Sbjct: 393 LGHPSDRVLASIHSLGN----NVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIH 448

Query: 89  VDVWGPCKEDSITNTSYFLTIVDDFSRG 6
           VD+WGP +  + +   YFLTIVDD SRG
Sbjct: 449 VDIWGPYRTPTTSGAHYFLTIVDDHSRG 476


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