BLASTX nr result

ID: Scutellaria22_contig00036343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036343
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   115   4e-24
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   107   1e-21
ref|XP_002304219.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...    97   1e-18

>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 1147

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = +1

Query: 1   AIVGCLALLRRKADVGKVMDSEAKAVAQSYLQNLQVQSLGQQDRKLSFQLMECLLDRYSG 180
           A+VGCLAL+RRK +VG +  ++AK+VAQSY QNLQVQSLGQ DRKLSF+L+ CLL+ Y  
Sbjct: 105 ALVGCLALMRRKTNVGSISQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPD 164

Query: 181 AIVDLGDNLVYGICEAI 231
           A+V LGD+LVYGICEAI
Sbjct: 165 AVVSLGDDLVYGICEAI 181


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/77 (62%), Positives = 68/77 (88%)
 Frame = +1

Query: 1   AIVGCLALLRRKADVGKVMDSEAKAVAQSYLQNLQVQSLGQQDRKLSFQLMECLLDRYSG 180
           A++GCLAL++RK+++G+V D++A+AVAQ+YL+N+QVQSLGQ DRKL F+++ECLLD Y  
Sbjct: 105 ALIGCLALMKRKSNMGRVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPE 164

Query: 181 AIVDLGDNLVYGICEAI 231
           ++  LGD+LVYGIC AI
Sbjct: 165 SVASLGDDLVYGICGAI 181


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/77 (64%), Positives = 65/77 (84%)
 Frame = +1

Query: 1   AIVGCLALLRRKADVGKVMDSEAKAVAQSYLQNLQVQSLGQQDRKLSFQLMECLLDRYSG 180
           A+VGCLAL+RRK+ VG V DS+A  +AQS+LQ +QVQSLGQ DRKL F+L++CLL+RY  
Sbjct: 105 ALVGCLALIRRKSVVGMVTDSDATTIAQSFLQYMQVQSLGQYDRKLCFELLDCLLERYFD 164

Query: 181 AIVDLGDNLVYGICEAI 231
           A+  LG++L+YGICEAI
Sbjct: 165 AVTTLGEDLIYGICEAI 181


>ref|XP_002304219.1| predicted protein [Populus trichocarpa] gi|222841651|gb|EEE79198.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/77 (67%), Positives = 64/77 (83%)
 Frame = +1

Query: 1   AIVGCLALLRRKADVGKVMDSEAKAVAQSYLQNLQVQSLGQQDRKLSFQLMECLLDRYSG 180
           A+VGCLAL++RK+  G V  S+AK VA+S+LQNLQVQSLGQ DRKL F+LMECLL+ Y  
Sbjct: 196 ALVGCLALVKRKSG-GMVTSSDAKGVAESFLQNLQVQSLGQHDRKLCFELMECLLEYYPH 254

Query: 181 AIVDLGDNLVYGICEAI 231
           A+  LGD+L+YGICEAI
Sbjct: 255 AVASLGDDLIYGICEAI 271


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = +1

Query: 1   AIVGCLALLRRKADVGKVMDSEAKAVAQSYLQNLQVQSLGQQDRKLSFQLMECLLDRYSG 180
           A+VGCLAL+RR+++ G +   +AK VA+SYLQNLQVQSL Q DRKL F+L+ECLL+    
Sbjct: 105 ALVGCLALIRRRSN-GIITGIDAKVVAESYLQNLQVQSLAQYDRKLCFELLECLLENCPA 163

Query: 181 AIVDLGDNLVYGICEAI 231
           A+  LG++L+YGICEAI
Sbjct: 164 AVASLGEDLIYGICEAI 180


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