BLASTX nr result

ID: Scutellaria22_contig00036294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036294
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...   207   7e-52
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   197   6e-49

>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  214 bits (544), Expect = 8e-54
 Identities = 95/133 (71%), Positives = 113/133 (84%)
 Frame = -1

Query: 413 YSLIELKGRIHIFLAGDRKHPQHAKIYLYLEELMVKLLEAGYVPSVASVLHDVDEEEKGM 234
           YSL+ELKGR+H+FL GD++HPQH KIY YLEEL VKL EAGYVP++ASVLHDVDEEEK M
Sbjct: 534 YSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEM 593

Query: 233 VLRIHSEKLAVVFGILNSVSGTPIQVIKNLRTCADCHMMIKLISRIADCEIVIRDPKRFH 54
           ++R+HSEKLAV FG++NS+ G+ I VIKNLR C DCH +IKLIS+I   EI++RD KRFH
Sbjct: 594 IVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFH 653

Query: 53  HFSKGTCSCGDYW 15
           HF  G CSCGDYW
Sbjct: 654 HFKDGLCSCGDYW 666


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  207 bits (527), Expect = 7e-52
 Identities = 95/133 (71%), Positives = 111/133 (83%)
 Frame = -1

Query: 413 YSLIELKGRIHIFLAGDRKHPQHAKIYLYLEELMVKLLEAGYVPSVASVLHDVDEEEKGM 234
           YS++E KGR+H+FL GD++HPQH KIY YL+EL VKL E GY+P+V SVL+DVD EEKGM
Sbjct: 540 YSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGM 599

Query: 233 VLRIHSEKLAVVFGILNSVSGTPIQVIKNLRTCADCHMMIKLISRIADCEIVIRDPKRFH 54
           VLR+HSEKLAV FGI+NSV G+ IQ+IKNLR C DCH  IKLIS+I + EIVIRD KRFH
Sbjct: 600 VLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFH 659

Query: 53  HFSKGTCSCGDYW 15
           HF  G CSCGDYW
Sbjct: 660 HFKDGLCSCGDYW 672


>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
            mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  202 bits (515), Expect = 2e-50
 Identities = 91/133 (68%), Positives = 107/133 (80%)
 Frame = -1

Query: 413  YSLIELKGRIHIFLAGDRKHPQHAKIYLYLEELMVKLLEAGYVPSVASVLHDVDEEEKGM 234
            +SL+++KGR+H+FL GDR+HPQH KIY YLE+L +KL E GYVP + SVLHDV  EEK M
Sbjct: 603  FSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEM 662

Query: 233  VLRIHSEKLAVVFGILNSVSGTPIQVIKNLRTCADCHMMIKLISRIADCEIVIRDPKRFH 54
            VLR+HSEKLAV FGI+N+V GT I +IKNLR C DCH  IK IS+I D EIV+RD KRFH
Sbjct: 663  VLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFH 722

Query: 53   HFSKGTCSCGDYW 15
            HF  G CSCGDYW
Sbjct: 723  HFRDGLCSCGDYW 735


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  202 bits (515), Expect = 2e-50
 Identities = 91/133 (68%), Positives = 107/133 (80%)
 Frame = -1

Query: 413 YSLIELKGRIHIFLAGDRKHPQHAKIYLYLEELMVKLLEAGYVPSVASVLHDVDEEEKGM 234
           +SL+++KGR+H+FL GDR+HPQH KIY YLE+L +KL E GYVP + SVLHDV  EEK M
Sbjct: 449 FSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEM 508

Query: 233 VLRIHSEKLAVVFGILNSVSGTPIQVIKNLRTCADCHMMIKLISRIADCEIVIRDPKRFH 54
           VLR+HSEKLAV FGI+N+V GT I +IKNLR C DCH  IK IS+I D EIV+RD KRFH
Sbjct: 509 VLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFH 568

Query: 53  HFSKGTCSCGDYW 15
           HF  G CSCGDYW
Sbjct: 569 HFRDGLCSCGDYW 581


>ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g26782, mitochondrial-like [Glycine max]
          Length = 555

 Score =  197 bits (502), Expect = 6e-49
 Identities = 88/133 (66%), Positives = 111/133 (83%)
 Frame = -1

Query: 413 YSLIELKGRIHIFLAGDRKHPQHAKIYLYLEELMVKLLEAGYVPSVASVLHDVDEEEKGM 234
           +S++ELKGRIH+ L GD++HPQH KIY YL++  VKL E GY+P+   VLHDVDEEEKGM
Sbjct: 423 FSIVELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGM 482

Query: 233 VLRIHSEKLAVVFGILNSVSGTPIQVIKNLRTCADCHMMIKLISRIADCEIVIRDPKRFH 54
           VLR+HSEKLAV FGI+NSV G+ I +IKNLR C DC+++IKLI ++ + EIV+RD KRFH
Sbjct: 483 VLRVHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFH 542

Query: 53  HFSKGTCSCGDYW 15
           HF +G+CSCGDYW
Sbjct: 543 HFKEGSCSCGDYW 555


Top