BLASTX nr result

ID: Scutellaria22_contig00036052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00036052
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889488.1| ATBARD1/BARD1 [Arabidopsis lyrata subsp. lyr...    81   8e-14
ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabido...    77   1e-12
ref|NP_973758.2| BRCA1-associated RING domain protein 1 [Arabido...    77   1e-12
ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago...    72   5e-11
ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...    70   1e-10

>ref|XP_002889488.1| ATBARD1/BARD1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335330|gb|EFH65747.1| ATBARD1/BARD1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 708

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = +2

Query: 80  LLNPCIFHMNKFRFELNCPLCLSLLNKPMLLPCNHILCNSCVPKSCQYSTKCP 238
           L+NP + H+ K   ELNCPLCL LLN+P+LLPC+H+ C+SCV KS Q  T CP
Sbjct: 8   LMNPWVLHLQKLELELNCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVETGCP 60


>ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
           gi|332189526|gb|AEE27647.1| BRCA1-associated RING domain
           protein 1 [Arabidopsis thaliana]
          Length = 714

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = +2

Query: 80  LLNPCIFHMNKFRFELNCPLCLSLLNKPMLLPCNHILCNSCVPKSCQYSTKCP 238
           L+NP + H+ K   EL CPLCL LLN+P+LLPC+H+ C+SCV KS Q  + CP
Sbjct: 8   LMNPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCP 60


>ref|NP_973758.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
           gi|332189525|gb|AEE27646.1| BRCA1-associated RING domain
           protein 1 [Arabidopsis thaliana]
          Length = 713

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = +2

Query: 80  LLNPCIFHMNKFRFELNCPLCLSLLNKPMLLPCNHILCNSCVPKSCQYSTKCP 238
           L+NP + H+ K   EL CPLCL LLN+P+LLPC+H+ C+SCV KS Q  + CP
Sbjct: 8   LMNPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCP 60


>ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
           gi|355500361|gb|AES81564.1| PHD finger protein 11-like
           protein [Medicago truncatula]
          Length = 687

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = +2

Query: 62  MSDMQKLLNPCIFHMNKFRFELNCPLCLSLLNKPMLLPCNHILCNSCVPKSCQYSTKC 235
           M++  KLLNP + H  K   EL CPLCL+L  KP+LLPCNH+ C+SC+  S    ++C
Sbjct: 9   MNNNTKLLNPWMLHFQKLALELKCPLCLNLFKKPVLLPCNHLFCSSCLADSTSIRSEC 66


>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +2

Query: 83  LNPCIFHMNKFRFELNCPLCLSLLNKPMLLPCNHILCNSCVPKSCQYSTKCP 238
           +NP + H+ K   EL CPLCL+ L +P LLPC+HI CNSC+ +  +++++CP
Sbjct: 14  MNPWVLHLQKLGLELKCPLCLNFLKRPFLLPCDHIFCNSCLHERTKFASECP 65


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