BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035993
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30782.1| photosystem I assembly protein ycf4 [Ficus sp. Mo...   164   9e-39
ref|YP_004940521.1| ycf4 gene product (chloroplast) [Boea hygrom...   161   4e-38
ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]...   160   8e-38
gb|ABG74742.1| YCF4 protein [Forsythia europaea]                      160   8e-38
ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chlorop...   160   1e-37

>gb|ADD30782.1| photosystem I assembly protein ycf4 [Ficus sp. Moore 315]
          Length = 184

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/85 (90%), Positives = 84/85 (98%)
 Frame = +3

Query: 3   GIVCIFRWGFPGKNRRIFLRFFIKDIQSVRIEVKEGIYARRILYMDIRGRGAIPLTRTDD 182
           GIVCIFRWGFPGKNRRIFLRF +KDIQS+RIEVKEGIYARR+LYM+IRG+G+IPLTRTD+
Sbjct: 100 GIVCIFRWGFPGKNRRIFLRFLMKDIQSIRIEVKEGIYARRVLYMEIRGQGSIPLTRTDE 159

Query: 183 NLTLREIEQKAAELAYFLCVPIEVF 257
           NLTLREIEQKAAELAYFLCVPIEVF
Sbjct: 160 NLTLREIEQKAAELAYFLCVPIEVF 184


>ref|YP_004940521.1| ycf4 gene product (chloroplast) [Boea hygrometrica]
           gi|340549418|gb|AEK53240.1| photosystem I assembly
           protein ycf4 (chloroplast) [Boea hygrometrica]
          Length = 184

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/85 (94%), Positives = 82/85 (96%)
 Frame = +3

Query: 3   GIVCIFRWGFPGKNRRIFLRFFIKDIQSVRIEVKEGIYARRILYMDIRGRGAIPLTRTDD 182
           GIVCIFRWGFPGKNRRIFLRF IKDIQS+RIEVKEGIYARRILYMDIRGRGAIPLTRTD+
Sbjct: 100 GIVCIFRWGFPGKNRRIFLRFRIKDIQSIRIEVKEGIYARRILYMDIRGRGAIPLTRTDE 159

Query: 183 NLTLREIEQKAAELAYFLCVPIEVF 257
           NLT REIEQKAAELAYFL VPIEVF
Sbjct: 160 NLTSREIEQKAAELAYFLHVPIEVF 184


>ref|YP_004376432.1| Ycf4 protein [Olea europaea subsp. europaea]
           gi|334700293|ref|YP_004563792.1| Ycf4 protein [Olea
           europaea subsp. cuspidata]
           gi|334701630|ref|YP_004564015.1| Ycf4 protein [Olea
           woodiana subsp. woodiana]
           gi|334701899|ref|YP_004564508.1| Ycf4 protein [Olea
           europaea subsp. maroccana]
           gi|365823322|ref|YP_003359370.2| Ycf4 (chloroplast)
           [Olea europaea] gi|291059264|gb|ADD72100.1| photosystem
           I assembly protein ycf4 [Olea europaea]
           gi|328795444|emb|CBR30326.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084412|emb|CBR23841.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|334084498|emb|CBR24633.1| Ycf4 protein [Olea europaea
           subsp. europaea] gi|334084584|emb|CBR30417.1| Ycf4
           protein [Olea europaea subsp. europaea]
           gi|334084670|emb|CBS29362.1| Ycf4 protein [Olea woodiana
           subsp. woodiana] gi|334084875|emb|CBS29253.1| Ycf4
           protein [Olea europaea subsp. maroccana]
           gi|334084961|emb|CBJ04309.1| Ycf4 protein [Olea europaea
           subsp. cuspidata] gi|334085047|emb|CBR23750.1| Ycf4
           protein [Olea europaea subsp. cuspidata]
           gi|363413087|gb|ADA69937.2| Ycf4 (chloroplast) [Olea
           europaea]
          Length = 184

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +3

Query: 3   GIVCIFRWGFPGKNRRIFLRFFIKDIQSVRIEVKEGIYARRILYMDIRGRGAIPLTRTDD 182
           GIVCIFRWGFPGKNRRIFLRF IKDIQSVRIEVKEGIYARR+LYMDIRG+GAIPLTRTD+
Sbjct: 100 GIVCIFRWGFPGKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDE 159

Query: 183 NLTLREIEQKAAELAYFLCVPIEVF 257
           NLT REIEQKAAELAYFL VPIEVF
Sbjct: 160 NLTPREIEQKAAELAYFLRVPIEVF 184


>gb|ABG74742.1| YCF4 protein [Forsythia europaea]
          Length = 184

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/85 (92%), Positives = 82/85 (96%)
 Frame = +3

Query: 3   GIVCIFRWGFPGKNRRIFLRFFIKDIQSVRIEVKEGIYARRILYMDIRGRGAIPLTRTDD 182
           GIVCIFRWGFPGKNRRIFLRF IKDIQSVRIEVKEGIYARR+LYMDIRG+GAIPLTRTD+
Sbjct: 100 GIVCIFRWGFPGKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGQGAIPLTRTDE 159

Query: 183 NLTLREIEQKAAELAYFLCVPIEVF 257
           NLT REIEQKAAELAYFL VPIEVF
Sbjct: 160 NLTPREIEQKAAELAYFLRVPIEVF 184


>ref|YP_007353926.1| photosystem I assembly protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438687615|emb|CCP47141.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688299|emb|CCP47230.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
           gi|438688423|emb|CCP47319.1| photosystem I assembly
           protein Ycf4 (chloroplast) [Tectona grandis]
          Length = 184

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/85 (92%), Positives = 81/85 (95%)
 Frame = +3

Query: 3   GIVCIFRWGFPGKNRRIFLRFFIKDIQSVRIEVKEGIYARRILYMDIRGRGAIPLTRTDD 182
           GIVCIFRWGFPGKNRRIFLRF IKDIQSVRIEVKEGIYARR+LYMDIRGRGAIPLTR D+
Sbjct: 100 GIVCIFRWGFPGKNRRIFLRFLIKDIQSVRIEVKEGIYARRVLYMDIRGRGAIPLTRADE 159

Query: 183 NLTLREIEQKAAELAYFLCVPIEVF 257
           NLT REIEQKAAELAYFL VPIEVF
Sbjct: 160 NLTPREIEQKAAELAYFLRVPIEVF 184