BLASTX nr result

ID: Scutellaria22_contig00035936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035936
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...    89   5e-16
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...    83   2e-14
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...    80   1e-13
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...    79   3e-13
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = +3

Query: 21  DDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVSSPRCCIDPEYYF 200
           D L G+  S  +LH  IY VPYSDHSCFSEIQEF+ELV+P  +KGIVSS  C I+P YYF
Sbjct: 298 DKLNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQPTSMKGIVSSSSCYINPVYYF 357

Query: 201 NHLCGKDQAMWR 236
             LC ++ +  R
Sbjct: 358 GRLCRENWSAQR 369


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/64 (59%), Positives = 45/64 (70%)
 Frame = +3

Query: 33  GNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVSSPRCCIDPEYYFNHLC 212
           G   S  KLH  I+ VPYSDH+CFSEIQEF++L+ P  +KGIVSS  C I+P YYF  LC
Sbjct: 302 GKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLICPTTIKGIVSSSSCYIEPLYYFGRLC 361

Query: 213 GKDQ 224
           G  Q
Sbjct: 362 GAKQ 365


>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/88 (45%), Positives = 56/88 (63%)
 Frame = +3

Query: 12  SKMDDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVSSPRCCIDPE 191
           +++D       SP K+H  IY VPYSDHS + EI++FV+LV+P  LKGIVSS  C I+P 
Sbjct: 290 TQIDKQIVKTGSPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPM 349

Query: 192 YYFNHLCGKDQAMWRAYQEVGTEGGTDG 275
           YYF  LC  +Q   + ++  G +G  +G
Sbjct: 350 YYFGRLCPGNQQTDQVHE--GCKGKENG 375


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +3

Query: 33  GNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVSSPRCCIDPEYYFNHLC 212
           G   S ++ H  IY VPYS+HSCF EI++F++LV+P+ +KGIVSS  C I+P YYF  LC
Sbjct: 303 GKLRSVVRFHQYIYSVPYSEHSCFPEIEDFIKLVQPINIKGIVSSSFCYIEPLYYFGGLC 362

Query: 213 GKDQAMWR 236
           G + +  R
Sbjct: 363 GVNPSSQR 370


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = +3

Query: 21  DDLAGNPASPMKLHDCIYVVPYSDHSCFSEIQEFVELVRPVKLKGIVSSPRCCIDPEYYF 200
           D L GN A   + H  ++ VPYS H CF+EIQEF+ELV+P  +KGIVSS  C +DP YYF
Sbjct: 284 DKLDGNLAYAERYHQYMFSVPYSYHLCFAEIQEFIELVQPANMKGIVSSSSCYVDPLYYF 343

Query: 201 NHLCGKDQ 224
           + L G +Q
Sbjct: 344 SRLYGVNQ 351


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