BLASTX nr result

ID: Scutellaria22_contig00035667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035667
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...    89   5e-16
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11

>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = +3

Query: 69  MQQVKEIHAHTLRNGADFSKHFISKLFEIRNIKYAHKVLDNIPNPTLFFYNKLIQAYSHH 248
           M+QVK+IH +TLRNG D +K  I KL EI N+ YAHKVL + P PTLF YNKLIQAYS H
Sbjct: 1   MRQVKQIHGYTLRNGIDQTKILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSH 60

Query: 249 GPH-IRCLSLYSEVL 290
             H  +C SLYS++L
Sbjct: 61  PQHQHQCFSLYSQML 75


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/73 (56%), Positives = 55/73 (75%)
 Frame = +3

Query: 69  MQQVKEIHAHTLRNGADFSKHFISKLFEIRNIKYAHKVLDNIPNPTLFFYNKLIQAYSHH 248
           M ++K+I A+TLRNG + +K  I  L +I +I YAHK+ D IP PT+F YNKLIQAYS H
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 249 GPHIRCLSLYSEV 287
           GPH +C SLY+++
Sbjct: 61  GPHHQCFSLYTQM 73


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/73 (56%), Positives = 55/73 (75%)
 Frame = +3

Query: 69  MQQVKEIHAHTLRNGADFSKHFISKLFEIRNIKYAHKVLDNIPNPTLFFYNKLIQAYSHH 248
           M ++K+I A+TLRNG + +K  I  L +I +I YAHK+ D IP PT+F YNKLIQAYS H
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 249 GPHIRCLSLYSEV 287
           GPH +C SLY+++
Sbjct: 61  GPHHQCFSLYTQM 73


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = +3

Query: 69  MQQVKEIHAHTLRNGADFSKHFISKLFEIRNIKYAHKVLDNIPNPTLFFYNKLIQAYSHH 248
           M Q+K+IHA+TLRNG D++K    +L +I N+ YAHK++D IP+P +F YNKLIQAYS  
Sbjct: 1   MNQLKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYSFQ 60

Query: 249 GPHIRCLSLYSEVLDR 296
               +C S+YS++  R
Sbjct: 61  NQLHQCFSIYSQMRSR 76


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/73 (43%), Positives = 48/73 (65%)
 Frame = +3

Query: 69  MQQVKEIHAHTLRNGADFSKHFISKLFEIRNIKYAHKVLDNIPNPTLFFYNKLIQAYSHH 248
           M Q+K+IHA++LRNG D +K  I KL ++ ++ YA  + D IP P+++ YNK IQ +S  
Sbjct: 1   MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60

Query: 249 GPHIRCLSLYSEV 287
           G   RC  LY ++
Sbjct: 61  GHPHRCWLLYCQM 73


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