BLASTX nr result

ID: Scutellaria22_contig00035644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035644
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...    86   3e-15
emb|CBI23992.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]    86   3e-15
emb|CAN64921.1| hypothetical protein VITISV_017200 [Vitis vinifera]    86   4e-15
ref|XP_002333594.1| glutamate-gated kainate-type ion channel rec...    85   7e-15

>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   AYDTMWGLAMAVEKVGFREPSSLQNTTDLINSTNMFITEISQTGPKLLTAMLETTFEGLG 182
           AYD    LAMAVEKVG     S Q T    NST++    +SQ GPKLL ++L T F+GL 
Sbjct: 322 AYDAASALAMAVEKVGATN-LSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLS 380

Query: 183 EKFRLVNGQLEPSSFQVLNVAGNGLREVGIWMP 281
             F++ +GQL P++FQ++NV G G R +G W P
Sbjct: 381 GDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTP 413


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   AYDTMWGLAMAVEKVGFREPSSLQNTTDLINSTNMFITEISQTGPKLLTAMLETTFEGLG 182
           AYD    LAMAVEKVG     S Q T    NST++    +SQ GPKLL ++L T F+GL 
Sbjct: 322 AYDAASALAMAVEKVGATN-LSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLS 380

Query: 183 EKFRLVNGQLEPSSFQVLNVAGNGLREVGIWMP 281
             F++ +GQL P++FQ++NV G G R +G W P
Sbjct: 381 GDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTP 413


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   AYDTMWGLAMAVEKVGFREPSSLQNTTDLINSTNMFITEISQTGPKLLTAMLETTFEGLG 182
           AYD    LAMAVEKVG     S Q T    NST++    +SQ GPKLL ++L T F+GL 
Sbjct: 322 AYDAASALAMAVEKVGATN-LSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLS 380

Query: 183 EKFRLVNGQLEPSSFQVLNVAGNGLREVGIWMP 281
             F++ +GQL P++FQ++NV G G R +G W P
Sbjct: 381 GDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTP 413


>emb|CAN64921.1| hypothetical protein VITISV_017200 [Vitis vinifera]
          Length = 830

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
 Frame = +3

Query: 3   AYDTMWGLAMAVEKVGFR--EPSSLQNTTDLINSTNMFITEISQTGPKLLTAMLETTFEG 176
           AYD +W LA A E++G R  +P  L++ +     TN+    +SQTG K+L A+L++ F G
Sbjct: 243 AYDAVWALARAYEEIGPRMSQPQKLKSWSKF---TNLASISVSQTGSKILKAILQSQFNG 299

Query: 177 LGEKFRLVNGQLEPSSFQVLNVAGNGLREVGIWMP 281
           L   F+L +GQLEP +FQ++NV GNG++ +G W P
Sbjct: 300 LSGNFQLKDGQLEPVAFQLVNVVGNGVKGIGFWTP 334


>ref|XP_002333594.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222837536|gb|EEE75901.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 754

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   AYDTMWGLAMAVEKVGFREPSSL-QNTTDLINSTNMFITEISQTGPKLLTAMLETTFEGL 179
           AYDT+W +AMAVE+ G      L QN ++   S ++    IS+ GP+LL ++L TTF+GL
Sbjct: 229 AYDTVWAIAMAVERAGIVHSRFLKQNASN--RSVDLAALGISEMGPRLLKSILNTTFDGL 286

Query: 180 GEKFRLVNGQLEPSSFQVLNVAGNGLREVGIW 275
             KF+LV G++EPS+F++ NV G   R +G W
Sbjct: 287 SGKFQLVKGEMEPSAFEIFNVVGRSERVIGYW 318


Top