BLASTX nr result

ID: Scutellaria22_contig00035591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035591
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]    63   3e-08
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,...    57   2e-06

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g73710-like [Vitis vinifera]
          Length = 1008

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = +1

Query: 127 FSHAQKKQ-SKKG--VYLGFKVQSRYKNVALPXXXXXXXXXXXXXXILPSVLRALEVEKD 297
           +SH QK++ + +G  V+ GFK+Q   + VALP              +LPS+LRALE E +
Sbjct: 79  YSHTQKQRLNPRGARVFPGFKLQCHSRTVALPTKTSISRRKKKYSGVLPSILRALESENN 138

Query: 298 VEEALNLYYGKLNPKEQTVILKE 366
           +E+ L+   GKL+PKEQTVILKE
Sbjct: 139 IEDTLS-SCGKLSPKEQTVILKE 160


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = +1

Query: 127 FSHAQKKQ-SKKG--VYLGFKVQSRYKNVALPXXXXXXXXXXXXXXILPSVLRALEVEKD 297
           +SH QK++ + +G  V+ GFK+Q   + VALP              +LPS+LRALE E +
Sbjct: 384 YSHTQKQRLNPRGARVFPGFKLQCHSRTVALPTKTSISRRKKKYSGVLPSILRALESEXN 443

Query: 298 VEEALNLYYGKLNPKEQTVILKE 366
           +E+ L+   GKL+PKEQTVILKE
Sbjct: 444 IEDTLS-SCGKLSPKEQTVILKE 465


>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1029

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +1

Query: 148 QSKKGVYLGFKVQSRYKNVALPXXXXXXXXXXXXXX-ILPSVLRALEVEKDVEEALNLYY 324
           Q K  V LGFK+    K + LP               +LPS+LR+L  + D+E+ LN + 
Sbjct: 84  QEKNRVSLGFKLHCHSKTLTLPTRNSSFNGKKKRYGGVLPSILRSLNSDNDIEKTLNSFG 143

Query: 325 GKLNPKEQTVILKE 366
             LNPKEQTVILKE
Sbjct: 144 DNLNPKEQTVILKE 157


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