BLASTX nr result

ID: Scutellaria22_contig00035153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00035153
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu...   118   6e-25
ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   114   8e-24
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   112   2e-23
ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|NP_172636.1| pentatricopeptide repeat-containing protein [Ar...   105   4e-21

>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/113 (49%), Positives = 75/113 (66%)
 Frame = -3

Query: 341 FVRGLHIGNKFTSPGAEDIIFKAVCVNLRQKKWEFLDQLSSCLTISLISRVFQELRSSPH 162
           F RG   G K  SP  EDII+KA+CVNL+Q++W+FL+Q+S  LT SL+ RV +E R+SP 
Sbjct: 14  FRRGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQ 73

Query: 161 LLLEFYQRGGGGKAILSSLESCCILIHVMVERKKYDDALHLMKELMISQGYLP 3
           L LEFY           SLESCC L+HV+V  + ++DAL +M+ LM+  G  P
Sbjct: 74  LALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKSP 126


>ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/113 (49%), Positives = 74/113 (65%)
 Frame = -3

Query: 341 FVRGLHIGNKFTSPGAEDIIFKAVCVNLRQKKWEFLDQLSSCLTISLISRVFQELRSSPH 162
           F RG H G K  SP  EDII KA+CVNL+Q++W+FL+QLS  LT SL+ RV +E R+SP 
Sbjct: 14  FRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQLSPSLTNSLVCRVIREFRNSPQ 73

Query: 161 LLLEFYQRGGGGKAILSSLESCCILIHVMVERKKYDDALHLMKELMISQGYLP 3
           L LEFY           SLES C L+HV+V  + ++DAL +M+ L++  G  P
Sbjct: 74  LALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSP 126


>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/113 (48%), Positives = 74/113 (65%)
 Frame = -3

Query: 341 FVRGLHIGNKFTSPGAEDIIFKAVCVNLRQKKWEFLDQLSSCLTISLISRVFQELRSSPH 162
           F RG H G K  SP  EDII KA+CVNL+Q++W+FL+Q+S  LT SL+ RV +E R+SP 
Sbjct: 14  FRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQ 73

Query: 161 LLLEFYQRGGGGKAILSSLESCCILIHVMVERKKYDDALHLMKELMISQGYLP 3
           L LEFY           SLES C L+HV+V  + ++DAL +M+ L++  G  P
Sbjct: 74  LALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSP 126


>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/118 (44%), Positives = 78/118 (66%)
 Frame = -3

Query: 356 KIRRFFVRGLHIGNKFTSPGAEDIIFKAVCVNLRQKKWEFLDQLSSCLTISLISRVFQEL 177
           K + F  R  H+G    +P ++D++ +A+CVNL+Q++W FL++  + LT +L+SRV  E 
Sbjct: 33  KRKCFLERSFHLGKSILNPISDDVVLRAICVNLKQRRWNFLEKNLASLTNALVSRVVCEF 92

Query: 176 RSSPHLLLEFYQRGGGGKAILSSLESCCILIHVMVERKKYDDALHLMKELMISQGYLP 3
           R++P L+LEFY   G  K++L SLE  C +IHV+V  ++YDDAL LM  LM   G  P
Sbjct: 93  RNTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSP 150


>ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11710, mitochondrial; Flags: Precursor
           gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14
           [Arabidopsis thaliana] gi|22655109|gb|AAM98145.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis
           thaliana] gi|332190652|gb|AEE28773.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
 Frame = -3

Query: 344 FFVRGLHIGNKFTSPGAEDIIFKAVCVNLRQKKWEFLDQLSSCLTISLISRVFQELRSSP 165
           F VR  H+  KF++P  EDI+F A+C+NLRQ++W  L Q SS LT  LISRV +E RSSP
Sbjct: 12  FLVRCFHVAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLISRVLREFRSSP 71

Query: 164 HLLLEFYQRGGGGKAILSS---LESCCILIHVMVERKKYDDALHLMKELMISQG 12
            L LEFY        +  S    E+ C++IH++V  +++DDAL +M  LM  +G
Sbjct: 72  KLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEG 125


Top