BLASTX nr result
ID: Scutellaria22_contig00034633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00034633
(297 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 121 7e-26
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi... 114 8e-24
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ... 108 5e-22
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ... 102 3e-20
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar... 99 3e-19
>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
protein product [Vitis vinifera]
Length = 727
Score = 121 bits (303), Expect = 7e-26
Identities = 56/99 (56%), Positives = 72/99 (72%)
Frame = +1
Query: 1 LKHFSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGF 180
L+ SRS P T ++ M+ + +DR+SFPPL+KA S+ SL EG +HGLA KLGF
Sbjct: 94 LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153
Query: 181 SSDPFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
SDPFV+T +V MYAACG I+EARL+FDKM H+DVV W+
Sbjct: 154 DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWS 192
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = +1
Query: 10 FSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGFSSD 189
++ S++P F MQ+ D+ + ++ A + +L + K +H K GF
Sbjct: 330 YAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGA 389
Query: 190 PFVETAVVGMYAACGLISEARLVFDKMPHKDVVAW 294
+ A++ MYA CG + AR +FDKMP K+V++W
Sbjct: 390 LPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424
>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 114 bits (285), Expect = 8e-24
Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 LKHFSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLG- 177
L+ FSR P NT + ++ FP+DR+SFPPL+KA SK +L+ G +HGLA K G
Sbjct: 87 LRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGF 146
Query: 178 FSSDPFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
F +DPF+++A++ MYAACG I +AR +FDKM H+DVV WN
Sbjct: 147 FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWN 186
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/96 (30%), Positives = 50/96 (52%)
Frame = +1
Query: 10 FSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGFSSD 189
++ S P F MQ + D+ + ++ A + +L + K +H A K GF
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 190 PFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
+ A++ MYA CG + +AR VF+ MP K+V++W+
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWS 419
>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 726
Score = 108 bits (270), Expect = 5e-22
Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 LKHFSRSNNPHNTFFFFQAMQN-KAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLG 177
L+H SRS+ P T F + ++ AF +DR+SFP L+KA SK + + G +HGLA KLG
Sbjct: 92 LRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLG 151
Query: 178 FSSDPFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
F DPF++T ++ MYA+C I +ARL+FDKM H D VAWN
Sbjct: 152 FVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWN 191
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/96 (29%), Positives = 49/96 (51%)
Frame = +1
Query: 10 FSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGFSSD 189
++ S+ P F M K D+ + ++ A S +L++ +H + GF
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 190 PFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
V A++ MYA CG + +AR VF+ MP K+V++W+
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWS 424
>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314084|gb|EFH44507.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 725
Score = 102 bits (254), Expect = 3e-20
Identities = 50/99 (50%), Positives = 65/99 (65%)
Frame = +1
Query: 1 LKHFSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGF 180
L+ SRS P T F+Q +++ DR SFPP++KA SK +L EG +HG A K+
Sbjct: 86 LRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIAT 145
Query: 181 SSDPFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
SDPFVET ++ MYAACG I+ AR VFD+M +DVV WN
Sbjct: 146 LSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWN 184
>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein
[Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 722
Score = 99.4 bits (246), Expect = 3e-19
Identities = 47/99 (47%), Positives = 67/99 (67%)
Frame = +1
Query: 1 LKHFSRSNNPHNTFFFFQAMQNKAFPIDRYSFPPLVKAASKSVSLSEGKMVHGLAVKLGF 180
L+ SRS+ P T F+Q +++ +D++SF P++KA SK +L EG +HG+A K+
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 181 SSDPFVETAVVGMYAACGLISEARLVFDKMPHKDVVAWN 297
DPFVET + MYA+CG I+ AR VFD+M H+DVV WN
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181