BLASTX nr result

ID: Scutellaria22_contig00034619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034619
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   234   5e-60
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   224   4e-57
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   200   9e-50
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar...   199   2e-49

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
            [Vitis vinifera]
          Length = 758

 Score =  234 bits (597), Expect = 5e-60
 Identities = 119/170 (70%), Positives = 138/170 (81%), Gaps = 6/170 (3%)
 Frame = +3

Query: 3    ALLSSCRLHHNVSLDELAAGIFFELEPRNPRNYVLLPNIYASKGKWKEVDKVRDI----- 167
            ALLSSCR+H+NVSL E+AA   FELEP NP NY+LL NIYASKG W EV++VRD+     
Sbjct: 560  ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 168  IREGTG-SWIEVNHKVHMLLAGDKSLPQMAQILEKLNKLSLEMKKAGYLPITDYVLQDVE 344
            +R+  G SWIEV +KVHMLLAGDKS PQM QI+EKL+KLS+EMKK GY P  ++VLQDVE
Sbjct: 620  LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVE 679

Query: 345  EQEKEHILCGHSEKLAVVFGILNTSEGSSVRVTKNLRICGDCHAFIKFIS 494
            EQ+KE ILCGHSEKLAVVFG+LNT  G  ++V KNLRICGDCH  IKFIS
Sbjct: 680  EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFIS 729


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
            predicted protein [Populus trichocarpa]
          Length = 716

 Score =  226 bits (577), Expect = 1e-57
 Identities = 116/170 (68%), Positives = 135/170 (79%), Gaps = 6/170 (3%)
 Frame = +3

Query: 3    ALLSSCRLHHNVSLDELAAGIFFELEPRNPRNYVLLPNIYASKGKWKEVDKVRDIIR--- 173
            ALLSSCR+H+ V L E+AA   FELEPRNP NY+LL NIYASK  W EVD VRD++R   
Sbjct: 518  ALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRG 577

Query: 174  --EGTG-SWIEVNHKVHMLLAGDKSLPQMAQILEKLNKLSLEMKKAGYLPITDYVLQDVE 344
              +  G SWIE+ +KVHMLLAGD S PQM QI+EKL KL++EMKK+GY+P TD+VLQDVE
Sbjct: 578  LKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVE 637

Query: 345  EQEKEHILCGHSEKLAVVFGILNTSEGSSVRVTKNLRICGDCHAFIKFIS 494
            EQ+KE ILCGHSEKLAVV G+LNT  G  ++V KNLRIC DCHA IKFIS
Sbjct: 638  EQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFIS 687


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Glycine max]
          Length = 748

 Score =  224 bits (572), Expect = 4e-57
 Identities = 113/170 (66%), Positives = 137/170 (80%), Gaps = 6/170 (3%)
 Frame = +3

Query: 3    ALLSSCRLHHNVSLDELAAGIFFELEPRNPRNYVLLPNIYASKGKWKEVDKVRDI----- 167
            ALLSSCR+H+N+SL E+AA   F LEP NP NY+LL NIYASKG W E +++R++     
Sbjct: 550  ALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKG 609

Query: 168  IREGTG-SWIEVNHKVHMLLAGDKSLPQMAQILEKLNKLSLEMKKAGYLPITDYVLQDVE 344
            +R+  G SWIEV HKVHMLLAGD+S PQM  ILEKL+KL+++MKK+GYLP T++VLQDVE
Sbjct: 610  LRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVE 669

Query: 345  EQEKEHILCGHSEKLAVVFGILNTSEGSSVRVTKNLRICGDCHAFIKFIS 494
            EQ+KE ILCGHSEKLAVV G+LNTS G  ++V KNLRIC DCHA IK IS
Sbjct: 670  EQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVIS 719


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  200 bits (509), Expect = 9e-50
 Identities = 105/158 (66%), Positives = 124/158 (78%), Gaps = 10/158 (6%)
 Frame = +3

Query: 3    ALLSSCRLHHNVSLDELAAGIFFELEPRNPRNYVLLPNIYASKGKWKEVDKVRDI----- 167
            ALLSSCR+H+NVSL E+AA   FELEP NP NY+LL NIYASKG W EV++VRD+     
Sbjct: 560  ALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKG 619

Query: 168  IREGTG-SWIEVNHKVHMLLAGDKSLPQMAQILEKLNKLSLEMKKAGYLPITDYVLQDVE 344
            +R+  G SWIEV +KVHMLLAGDKS PQM QI+E L+KLS+EMKK GY P  ++VLQDVE
Sbjct: 620  LRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVE 679

Query: 345  EQEKEHILCGHSEKLAVVFGILNTSEG----SSVRVTK 446
            EQ+KE ILCGHSEKLAVVFG+LNT  G    S ++ TK
Sbjct: 680  EQDKEQILCGHSEKLAVVFGLLNTPPGYPLQSEIQATK 717


>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/170 (59%), Positives = 130/170 (76%), Gaps = 6/170 (3%)
 Frame = +3

Query: 3    ALLSSCRLHHNVSLDELAAGIFFELEPRNPRNYVLLPNIYASKGKWKEVDKVRDI----- 167
            ALL+SCRL +NV L E+AA   F LEP NP  YVLL NIYA+KG W EVD +R+      
Sbjct: 562  ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621

Query: 168  IREGTG-SWIEVNHKVHMLLAGDKSLPQMAQILEKLNKLSLEMKKAGYLPITDYVLQDVE 344
            +++  G SWI+V ++V+ LLAGDKS PQ+ QI EK++++S EM+K+G+ P  D+ L DVE
Sbjct: 622  LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVE 681

Query: 345  EQEKEHILCGHSEKLAVVFGILNTSEGSSVRVTKNLRICGDCHAFIKFIS 494
            EQE+E +L GHSEKLAVVFG+LNT +G+ ++V KNLRICGDCHA IKFIS
Sbjct: 682  EQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFIS 731


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