BLASTX nr result

ID: Scutellaria22_contig00034596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034596
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...   124   8e-27
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20

>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/137 (51%), Positives = 94/137 (68%)
 Frame = +2

Query: 2   TTIAASFIDACHSLNLLNSAAFPLYINDRTRPHTFTCNTLLKAFSHSSAPQKSPLVYSHM 181
           TTIA  FI AC SL LL+SA   L     ++PH F CN+L++AFSH+  P     +Y+HM
Sbjct: 43  TTIAHHFITACQSLGLLDSAL--LLFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHM 100

Query: 182 RRNLIPVNHYTFPFVLKALADLKLIQGGVSVHAHTIKLGFANDVYVGNALLNLYAATGNM 361
             N I  N++TFPF+LK+LAD K +  G  +H H +KLG  +D+YV N+LLN+YA+ G+M
Sbjct: 101 HSNSILPNNFTFPFLLKSLADFKGLSEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCGDM 160

Query: 362 VECGKVFDEMPVRDVVS 412
             C +VFDEMP RDVVS
Sbjct: 161 GLCMRVFDEMPHRDVVS 177


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 8   IAASFIDACHSLNLLNSAAFPLYINDRTRPHTFTCNTLLKAFSHSSAPQKSPLVYSHMRR 187
           IA  FI+ CH L+LL SA   L+     +PH F CN+L++AFSHS  P     +Y+HM R
Sbjct: 46  IAHHFINTCHHLHLLGSAF--LFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNR 103

Query: 188 NLIPVNHYTFPFVLKALADLKLIQGGVSVHAHTIKLGFANDVYVGNALLNLYAATGNMVE 367
           N I  N+YTFPFVLK+LAD K + GG SVH H +K G A+D+YV N L+++YA+ G M  
Sbjct: 104 NSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGL 163

Query: 368 CGKVFDEMPVRDVVS 412
           C KVFDEM   DVVS
Sbjct: 164 CKKVFDEMLHTDVVS 178


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 8   IAASFIDACHSLNLLNSAAFPLYINDRTRPHTFTCNTLLKAFSHSSAPQKSPLVYSHMRR 187
           IA  FI+ CH L+LL SA   L+     +PH F CN+L++AFSHS  P     +Y+HM R
Sbjct: 46  IAHHFINTCHHLHLLGSAF--LFFTHIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNR 103

Query: 188 NLIPVNHYTFPFVLKALADLKLIQGGVSVHAHTIKLGFANDVYVGNALLNLYAATGNMVE 367
           N I  N+YTFPFVLK+LAD K + GG SVH H +K G A+D+YV N L+++YA+ G M  
Sbjct: 104 NSISPNNYTFPFVLKSLADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGL 163

Query: 368 CGKVFDEMPVRDVVS 412
           C KVFDEM   DVVS
Sbjct: 164 CKKVFDEMLHTDVVS 178


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/137 (47%), Positives = 89/137 (64%)
 Frame = +2

Query: 2   TTIAASFIDACHSLNLLNSAAFPLYINDRTRPHTFTCNTLLKAFSHSSAPQKSPLVYSHM 181
           TTIA   I A  S NLLN  + PL+ +   +PH F  N+L++AFSHS  P     +YSHM
Sbjct: 42  TTIAEHLITASQSHNLLNYVS-PLFTHLIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHM 100

Query: 182 RRNLIPVNHYTFPFVLKALADLKLIQGGVSVHAHTIKLGFANDVYVGNALLNLYAATGNM 361
            +N I  N++TFPF+ K+L+D         V+ H IKLG+ ND+YV N+LL++YA+ G +
Sbjct: 101 HKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCL 160

Query: 362 VECGKVFDEMPVRDVVS 412
             C ++FDEMP RDVVS
Sbjct: 161 ELCRQLFDEMPQRDVVS 177


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
 Frame = +2

Query: 11  AASFIDACHSLNLLNSAAFPLYINDRT-RPHTFTCNTLLKAFSHSSAPQKSPLVYSHMRR 187
           A+  +  C S N   S A+   + DR  RP+TF  NT+++ +S+S  P+++ L+Y HM  
Sbjct: 53  ASKLLAFCASPNS-GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLY 111

Query: 188 NLIPVNHYTFPFVLKALADLKLIQGGVSVHAHTIKLGFANDVYVGNALLNLYAATGNMVE 367
           + +P N YTFPF+LKA + +  ++    +HAH IK+GF +++Y  N+LLN+Y+ +G++  
Sbjct: 112 HSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKS 171

Query: 368 CGKVFDEMPVRDVVS 412
              +FD++  RD VS
Sbjct: 172 ARLLFDQVDQRDTVS 186


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