BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034372
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   138   4e-31
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   134   6e-30
emb|CBI31172.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   128   5e-28
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   123   2e-26

>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/154 (46%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
 Frame = +2

Query: 5   HRFTTVILCIYSNFNLLQECRSLFNTFRSPPPSKAWRAIMKCYASTGNFDGSIALFKKMR 184
           H   ++++ IY+N  LL E   LF T +SPP   AW+++++C+     F  ++A F +MR
Sbjct: 39  HTSASIVISIYTNLKLLHEALLLFKTLKSPPVL-AWKSVIRCFTDQSLFSKALASFVEMR 97

Query: 185 ALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACVIRLGLDIDLFTGNALMNMYAKLEALG 364
           A G+ PD NVFPS+LK+C  + DLRFGE+VH  ++RLG+D DL+TGNALMNMYAKL  +G
Sbjct: 98  ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMG 157

Query: 365 AR----NVFDGGSEPKRLFGFDKDVKMQDSIERF 454
           ++    NVFD   +     G D+DVK +  I  F
Sbjct: 158 SKISVGNVFDEMPQRTSNSG-DEDVKAETCIMPF 190



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +2

Query: 107 AWRAIMKCYASTGNFDGSIALFKKMRALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACV 286
           +W +++  Y   G ++ ++ LF++M      P    F S++  CAHL  L  G+ +H  V
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369

Query: 287 IRLGLDIDLFTGNALMNMYAKLEAL-GARNVFD 382
           +R G   ++F  +AL++MY+K   +  AR +FD
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/128 (53%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
 Frame = +2

Query: 17  TVILCIYSNFNLLQECRSLFNTFRSPPPSKAWRAIMKCYASTGNFDGSIALFKKMRALGK 196
           + IL IYSN NLL +   +FN+  SPP + AW++I++CY S G F  S++ F +M A GK
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 197 SPDKNVFPSLLKTCAHLGDLRFGEAVHACVIRLGLDIDLFTGNALMNMYAKLEALGARN- 373
            PD NVFPS+LK+C  + DLRFGE+VH C+IRLG+  DL+T NALMNMY+K  +L   N 
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 374 ---VFDGG 388
              VFD G
Sbjct: 163 YKKVFDEG 170



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +2

Query: 107 AWRAIMKCYASTGNFDGSIALFKKMRALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACV 286
           +W +I+      G FD  +  F++M      P+   F S++  CAHL  L  G+ +H  +
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 287 IRLGLDIDLFTGNALMNMYAKLEAL-GARNVFD 382
           IR   D ++F  +AL++MYAK   +  AR +FD
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFD 396


>emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/128 (53%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
 Frame = +2

Query: 17  TVILCIYSNFNLLQECRSLFNTFRSPPPSKAWRAIMKCYASTGNFDGSIALFKKMRALGK 196
           + IL IYSN NLL +   +FN+  SPP + AW++I++CY S G F  S++ F +M A GK
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 197 SPDKNVFPSLLKTCAHLGDLRFGEAVHACVIRLGLDIDLFTGNALMNMYAKLEALGARN- 373
            PD NVFPS+LK+C  + DLRFGE+VH C+IRLG+  DL+T NALMNMY+K  +L   N 
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 374 ---VFDGG 388
              VFD G
Sbjct: 163 YKKVFDEG 170


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/127 (47%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
 Frame = +2

Query: 5   HRFTTVILCIYSNFNLLQECRSLFNTFRSPPPSKAWRAIMKCYASTGNFDGSIALFKKMR 184
           H   ++++ IY+N  LL E   +F T  SPP   AW+++++C+     F  ++A F +MR
Sbjct: 39  HTSASIVISIYTNLKLLHEALLVFKTLESPPVL-AWKSVIRCFTDQSLFSRALASFVEMR 97

Query: 185 ALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACVIRLGLDIDLFTGNALMNMYAKLEAL- 361
           A G+ PD NVFPS+LK+C  + DLRFGE+VH  ++RLG+D DL+TGNALMNMY+KL  + 
Sbjct: 98  ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGID 157

Query: 362 GARNVFD 382
             R VF+
Sbjct: 158 SVRKVFE 164



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = +2

Query: 101 SKAWRAIMKCYASTGNFDGSIALFKKMRALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHA 280
           S +W +++  Y   G ++ ++ LF++M +    P    F S++  CAHL  L  G+ +H 
Sbjct: 272 SISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHG 331

Query: 281 CVIRLGLDIDLFTGNALMNMYAKLEAL-GARNVFD 382
            V+R G   ++F  +AL++MY+K   +  AR +FD
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFD 366


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/137 (48%), Positives = 89/137 (64%), Gaps = 8/137 (5%)
 Frame = +2

Query: 17  TVILCIYSNFNLLQECRSLFNTFRSPPPSKAWRAIMKCYASTGNFDGSIALFKKMRALGK 196
           +++L IYS+ NLL +   LFNT   PP + AW+++++CY S G    S+  F  M A G 
Sbjct: 44  SLLLSIYSHINLLHDSLRLFNTIHFPP-ALAWKSVIRCYTSHGLPHQSLGSFIGMLASGL 102

Query: 197 SPDKNVFPSLLKTCAHLGDLRFGEAVHACVIRLGLDIDLFTGNALMNMYAKL-------- 352
            PD NVFPS+LK+CA L DL  GE++H  +IR+GLD DL+TGNALMNMY+KL        
Sbjct: 103 YPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGR 162

Query: 353 EALGARNVFDGGSEPKR 403
           + LGA  VFD  +E  R
Sbjct: 163 QRLGAGEVFDEMTERTR 179



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +2

Query: 107 AWRAIMKCYASTGNFDGSIALFKKMRALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACV 286
           +W +I+      G FD  +  F++M      P    F S++  CAHL  L  G+ +H  +
Sbjct: 307 SWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366

Query: 287 IRLGLDIDLFTGNALMNMYAKLEAL-GARNVFD 382
            R G D ++F  ++L++MYAK   +  A+ +FD
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%)
 Frame = +2

Query: 107 AWRAIMKCYASTGNFDGSIALFKKMRALGKSPDKNVFPSLLKTCAHLGDLRFGEAVHACV 286
           +W  I+   A  G ++ ++ + ++M      PD     S+L   A   D+  G+ +H C 
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCS 265

Query: 287 IRLGLDIDLFTGNALMNMYAK 349
           IR GLD D++  ++L++MYAK
Sbjct: 266 IRQGLDADIYVASSLIDMYAK 286