BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034361
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353906.1| RNA polymerase beta' subunit (chloroplast) [...   223   1e-56
gb|ADT63344.1| RNA polymerase beta subunit [Scutellaria laterifl...   223   1e-56
gb|ADT63343.1| RNA polymerase beta subunit [Scutellaria laterifl...   223   1e-56
gb|ACB58652.1| RNA polymerase C [Scutellaria indica] gi|17191855...   223   1e-56
gb|ACB58648.1| RNA polymerase C [Pogostemon cablin] gi|171918564...   221   4e-56

>ref|YP_007353906.1| RNA polymerase beta' subunit (chloroplast) [Tectona grandis]
           gi|438687595|emb|CCP47121.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
           gi|438688279|emb|CCP47210.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
           gi|438688403|emb|CCP47299.1| RNA polymerase beta'
           subunit (chloroplast) [Tectona grandis]
          Length = 684

 Score =  223 bits (568), Expect = 1e-56
 Identities = 112/115 (97%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   LHRHELPSEIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 182
           LHR  LP EIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL
Sbjct: 396 LHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 455

Query: 183 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 347
           LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ
Sbjct: 456 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 510


>gb|ADT63344.1| RNA polymerase beta subunit [Scutellaria lateriflora]
          Length = 161

 Score =  223 bits (568), Expect = 1e-56
 Identities = 112/115 (97%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   LHRHELPSEIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 182
           LHR  LP EIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL
Sbjct: 24  LHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 83

Query: 183 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 347
           LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ
Sbjct: 84  LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 138


>gb|ADT63343.1| RNA polymerase beta subunit [Scutellaria lateriflora]
          Length = 149

 Score =  223 bits (568), Expect = 1e-56
 Identities = 112/115 (97%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   LHRHELPSEIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 182
           LHR  LP EIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL
Sbjct: 11  LHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 70

Query: 183 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 347
           LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ
Sbjct: 71  LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 125


>gb|ACB58652.1| RNA polymerase C [Scutellaria indica] gi|171918554|gb|ACB58656.1|
           RNA polymerase C [Scutellaria baicalensis]
           gi|171918562|gb|ACB58660.1| RNA polymerase C
           [Scutellaria rehderiana]
          Length = 162

 Score =  223 bits (568), Expect = 1e-56
 Identities = 112/115 (97%), Positives = 112/115 (97%)
 Frame = +3

Query: 3   LHRHELPSEIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 182
           LHR  LP EIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL
Sbjct: 24  LHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 83

Query: 183 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 347
           LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ
Sbjct: 84  LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 138


>gb|ACB58648.1| RNA polymerase C [Pogostemon cablin] gi|171918564|gb|ACB58661.1|
           RNA polymerase C [Anisomeles indica]
           gi|305377136|gb|ADM47840.1| RNA polymerase C [Pogostemon
           cablin] gi|305377138|gb|ADM47841.1| RNA polymerase C
           [Pogostemon cablin]
          Length = 162

 Score =  221 bits (564), Expect = 4e-56
 Identities = 111/115 (96%), Positives = 111/115 (96%)
 Frame = +3

Query: 3   LHRHELPSEIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 182
           LHR  LP EIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL
Sbjct: 24  LHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKELIVWEILQEVMQGHPVL 83

Query: 183 LNRAPTLHKLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 347
           LNRAPTLHKLGIQAFQPILVEGR ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ
Sbjct: 84  LNRAPTLHKLGIQAFQPILVEGRTICLHPLVCKGFNADFDGDQMAVHVPLSLEAQ 138