BLASTX nr result

ID: Scutellaria22_contig00034299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034299
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
emb|CBI25349.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...    78   7e-13
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...    67   2e-09

>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   EAGLKEKASNLRAVMRDKGLTKLPGCSWIESKNKVEVFFSGDSSSTKTVKIYEALESLKN 181
           E  + ++A+NLRA M+ +GL K PGCSWIE KN+V+VFFSGDSSST+ ++IY+ L SLK+
Sbjct: 762 EVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKS 821

Query: 182 IMKRRECDYE 211
            M+ + C YE
Sbjct: 822 NMEGKGCSYE 831


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = +2

Query: 2    EAGLKEKASNLRAVMRDKGLTKLPGCSWIESKNKVEVFFSGDSSSTKTVKIYEALESLKN 181
            E  + ++A+NLRA M+ +GL K PGCSWIE KN+V+VFFSGDSSST+ ++IY+ L SLK+
Sbjct: 1167 EVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKS 1226

Query: 182  IMKRRECDYE 211
             M+ + C YE
Sbjct: 1227 NMEGKGCSYE 1236


>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/73 (53%), Positives = 55/73 (75%)
 Frame = +2

Query: 2   EAGLKEKASNLRAVMRDKGLTKLPGCSWIESKNKVEVFFSGDSSSTKTVKIYEALESLKN 181
           E  L+++A+NLRA M++KGL K PGCSWIE  N ++VFFSGDSSS +T++IY+ L SL+ 
Sbjct: 774 ENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRR 833

Query: 182 IMKRRECDYEEGE 220
            M+++   YE  E
Sbjct: 834 NMRKKGGHYESVE 846


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/65 (58%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   EAGLKEKASNLRAVMRDKGLTKLPGCSWIESKNKVEVFFSGDSSSTKTVKIYEALESLK- 178
           EA L ++ +NLRA M++KGL K PGCSWIE +NKV+VF+SGD SS  T +IY+ L SLK 
Sbjct: 759 EAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKR 818

Query: 179 NIMKR 193
           N++K+
Sbjct: 819 NMIKK 823


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = +2

Query: 2   EAGLKEKASNLRAVMRDKGLTKLPGCSWIESKNKVEVFFSGDSSSTKTVKIYEALESLKN 181
           EAGLK +A+ L  +M++KGL K PGCSWIE  ++  VFFSG SSS    +I+  L  LK+
Sbjct: 792 EAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKS 851

Query: 182 IM 187
            M
Sbjct: 852 NM 853


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