BLASTX nr result

ID: Scutellaria22_contig00034292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034292
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
emb|CBI22024.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  129 bits (324), Expect = 2e-28
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = +2

Query: 5   LLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDCHVAMKYISVVRRRKIILRDSSRFHH 184
           L HHSEKLA+AFALMNTP  VPIR+MKNLR+C DCHVA+KYIS +++ +II+RDSSRFHH
Sbjct: 603 LRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHH 662

Query: 185 FENGHCSCGDYW 220
           F+NG CSCGDYW
Sbjct: 663 FKNGTCSCGDYW 674


>emb|CBI22024.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score =  124 bits (310), Expect = 1e-26
 Identities = 52/73 (71%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   NLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDCHVAMKYISVVRRRKIILRDSSRFH 181
           +L+HHSEKLA+AFAL+ TP   PIR++KNLR+C DCHVA+KYIS +  R+II+RDSSRFH
Sbjct: 47  SLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFH 106

Query: 182 HFENGHCSCGDYW 220
           HF+NG CSCGDYW
Sbjct: 107 HFKNGRCSCGDYW 119


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  124 bits (310), Expect = 1e-26
 Identities = 52/73 (71%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   NLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDCHVAMKYISVVRRRKIILRDSSRFH 181
           +L+HHSEKLA+AFAL+ TP   PIR++KNLR+C DCHVA+KYIS +  R+II+RDSSRFH
Sbjct: 585 SLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFH 644

Query: 182 HFENGHCSCGDYW 220
           HF+NG CSCGDYW
Sbjct: 645 HFKNGRCSCGDYW 657


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  122 bits (306), Expect = 3e-26
 Identities = 52/73 (71%), Positives = 64/73 (87%)
 Frame = +2

Query: 2   NLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDCHVAMKYISVVRRRKIILRDSSRFH 181
           NL HHSEK A+AFALMNT  +VPIR+MKNLR+CDDCH A+K IS +R R+II+RD+SRFH
Sbjct: 595 NLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFH 654

Query: 182 HFENGHCSCGDYW 220
           HF++G CSCG+YW
Sbjct: 655 HFKDGECSCGNYW 667


>ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  120 bits (301), Expect = 1e-25
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = +2

Query: 2   NLLHHSEKLAVAFALMNTPHSVPIRIMKNLRICDDCHVAMKYISVVRRRKIILRDSSRFH 181
           +L HHSEKLA+AFA +N P  VPIR+MKNLR+CDDCHVA+K IS V  R+I++RD SRFH
Sbjct: 575 SLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFH 634

Query: 182 HFENGHCSCGDYW 220
           HF +G CSCGDYW
Sbjct: 635 HFRDGRCSCGDYW 647


Top