BLASTX nr result

ID: Scutellaria22_contig00034226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034226
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...    97   2e-18
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...    94   1e-17
ref|XP_002324375.1| glutamate-gated kainate-type ion channel rec...    92   4e-17
ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...    91   7e-17
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...    91   1e-16

>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 856

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = -1

Query: 276 VFVMHMSQFLGTKLFLKARELGMMTEGYAWIVTSGLT-DLFSLVNSDVVEAMQGFLGVRP 100
           VF++HM Q LGT+LF KA+E+GMM+EGY WI+T GLT DL S  N  V + MQG LG++P
Sbjct: 227 VFIVHMYQSLGTRLFAKAKEIGMMSEGYVWIMTDGLTADLLSTPNYSVTDTMQGVLGIKP 286

Query: 99  VISKSKELQAMAARWIRASLQDNQDM 22
            + ++KEL+    RW R   QDN D+
Sbjct: 287 HVPRTKELKDFRVRWKRKFQQDNPDI 312


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 42/82 (51%), Positives = 58/82 (70%)
 Frame = -1

Query: 276 VFVMHMSQFLGTKLFLKARELGMMTEGYAWIVTSGLTDLFSLVNSDVVEAMQGFLGVRPV 97
           VF++HM   LG++L  KARE+GMM+EGY WI+T+G++D    +   V+E+MQG LGVRP 
Sbjct: 201 VFILHMLPSLGSRLLTKAREVGMMSEGYVWIMTNGMSDYLRSLTPSVIESMQGVLGVRPY 260

Query: 96  ISKSKELQAMAARWIRASLQDN 31
           + K+KEL+    RW    LQDN
Sbjct: 261 VPKTKELEIFYVRWKSKFLQDN 282


>ref|XP_002324375.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865809|gb|EEF02940.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 843

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
 Frame = -1

Query: 276 VFVMHMSQFLGTKLFLKARELGMMTEGYAWIVTSGL-TDLFSLVNSDVVEAMQGFLGVRP 100
           VF++HM  +LGT+LF KA+E+GMM+EGY WI+T GL TD  S  +  V + +QG LG++P
Sbjct: 220 VFIVHMYGYLGTRLFAKAKEIGMMSEGYVWIMTDGLTTDFLSSPSPSVTDTIQGVLGIKP 279

Query: 99  VISKSKELQAMAARWIRASLQDN 31
            + ++KEL+    RW R  LQDN
Sbjct: 280 YVPRTKELENFRVRWKRKFLQDN 302


>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 961

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = -1

Query: 276 VFVMHMSQFLGTKLFLKARELGMMTEGYAWIVTSGLTDLFSLVNSDVVEAMQGFLGVRPV 97
           VF++HM   LG++L  KARE GMM+EGY WI+T+G++D    +   V+E+MQG LGV+P 
Sbjct: 225 VFILHMLPSLGSRLLTKAREAGMMSEGYVWIMTNGMSDYLRSLTPSVIESMQGVLGVKPY 284

Query: 96  ISKSKELQAMAARWIRASLQDN 31
           + K+KEL+    RW    LQDN
Sbjct: 285 VPKTKELENFYVRWKSKFLQDN 306


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
 Frame = -1

Query: 276 VFVMHMSQFLGTKLFLKARELGMMTEGYAWIVTSGLT-DLFSLVNSDVVEAMQGFLGVRP 100
           VF++HM   LGT+LF KA+E+GMM+EGY WI+T GL+ D  S  N  V + +QG LG++P
Sbjct: 205 VFIVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGLSVDFLSSPNHSVTDTIQGVLGIKP 264

Query: 99  VISKSKELQAMAARWIRASLQDN 31
            + ++KEL+   ARW R  L+DN
Sbjct: 265 YVPRTKELEYFRARWKRKFLRDN 287


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