BLASTX nr result

ID: Scutellaria22_contig00034061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034061
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...   117   1e-24
emb|CBI26175.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22

>ref|XP_002314420.1| predicted protein [Populus trichocarpa] gi|222863460|gb|EEF00591.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/79 (70%), Positives = 65/79 (82%)
 Frame = +2

Query: 2   KADVATWTTLLAACKMYENTDIGERAALNLVKVEPSHGPSRVLLSNLYADVGRWDDAFLV 181
           KADV  W  LL+ACK + N  IGERAA NL K++PSHGPSR+LLSNLYADVGRW+DAFLV
Sbjct: 493 KADVVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAFLV 552

Query: 182 RRAMRSGKLTRSPGYSGVV 238
           RR M+S ++ R PGYSGVV
Sbjct: 553 RRVMQSHRMHRLPGYSGVV 571


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +2

Query: 2   KADVATWTTLLAACKMYENTDIGERAALNLVKVEPSHGPSRVLLSNLYADVGRWDDAFLV 181
           KADV  W TLLAAC+ + N D+GERAA NL ++EPSHG SRVLLSN+YAD G+W+DAFLV
Sbjct: 630 KADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLV 689

Query: 182 RRAMRSGKLTRSPGYSGV 235
           RRAM+S ++ R PGYSGV
Sbjct: 690 RRAMQSHRMQRLPGYSGV 707


>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +2

Query: 2   KADVATWTTLLAACKMYENTDIGERAALNLVKVEPSHGPSRVLLSNLYADVGRWDDAFLV 181
           KADV  W TLLAAC+ + N +IGERAA NL K++ SHG  RVLLSN+YAD GRWDDAFLV
Sbjct: 541 KADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLV 600

Query: 182 RRAMRSGKLTRSPGYSGVV 238
           RRAM+S ++ +SPG SGVV
Sbjct: 601 RRAMQSQRMKKSPGCSGVV 619


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +2

Query: 2   KADVATWTTLLAACKMYENTDIGERAALNLVKVEPSHGPSRVLLSNLYADVGRWDDAFLV 181
           KADV  W TLLAAC+ + N +IGERAA NL K++ SHG  RVLLSN+YAD GRWDDAFLV
Sbjct: 616 KADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLV 675

Query: 182 RRAMRSGKLTRSPGYSGVV 238
           RRAM+S ++ +SPG SGVV
Sbjct: 676 RRAMQSQRMKKSPGCSGVV 694


>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = +2

Query: 2   KADVATWTTLLAACKMYENTDIGERAALNLVKVEPSHGPSRVLLSNLYADVGRWDDAFLV 181
           KADV  W TLLA+ + +   +IGERAA NL +++PSHGP RVLLSNLYAD G W+DA LV
Sbjct: 625 KADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALV 684

Query: 182 RRAMRSGKLTRSPGYSGVV 238
           RRA++S ++ RSPGYSGVV
Sbjct: 685 RRAIQSQRMIRSPGYSGVV 703


Top