BLASTX nr result

ID: Scutellaria22_contig00034026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00034026
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu...   104   7e-21
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,...   102   3e-20
ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002889890.1| pentatricopeptide repeat-containing protein ...   100   2e-19
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    99   4e-19

>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/89 (53%), Positives = 62/89 (69%)
 Frame = -2

Query: 372 FNEMRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSK 193
           F EM   G LVN V+YNIMI  LCK GL + A +L+  M SQG+ PD +TYTTL+TN  K
Sbjct: 554 FLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVK 613

Query: 192 KNNFEEVIEMHDYLVLRGVIPDTHTYESI 106
               + VIE+HDY+VL+G +PD  TY+S+
Sbjct: 614 SYGSDNVIELHDYMVLKGAVPDRQTYQSL 642


>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  102 bits (255), Expect = 3e-20
 Identities = 48/89 (53%), Positives = 67/89 (75%)
 Frame = -2

Query: 372 FNEMRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSK 193
           F+EMR +G L + VTYN +I  LCK G    AK+L+ +M+ +GL PD VTYT L+T+ SK
Sbjct: 503 FSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSK 562

Query: 192 KNNFEEVIEMHDYLVLRGVIPDTHTYESI 106
           K + EEVIE+HDY+VL+GV+PD  TY+++
Sbjct: 563 KCSPEEVIELHDYMVLKGVVPDRQTYQTM 591



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = -2

Query: 363 MRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSKKNN 184
           +R+ G L + VTYN +I   C  G  + A  L S M + G+    VTY TL+ +L K  +
Sbjct: 472 LRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGH 530

Query: 183 FEEVIEMHDYLVLRGVIPDTHTY 115
             +  E+   +VLRG+IPD  TY
Sbjct: 531 VLQAKELMKMMVLRGLIPDYVTY 553


>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/86 (51%), Positives = 65/86 (75%)
 Frame = -2

Query: 363 MRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSKKNN 184
           M+  G L +  TYN +IK LCKFG  + AK+L+++M+  G+ PD++TY TL+ N++K  +
Sbjct: 581 MQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCS 640

Query: 183 FEEVIEMHDYLVLRGVIPDTHTYESI 106
            EEVIE+HDY+VL+GV+PD  TYE+I
Sbjct: 641 AEEVIELHDYMVLKGVVPDKLTYENI 666



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/88 (34%), Positives = 50/88 (56%)
 Frame = -2

Query: 369 NEMRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSKK 190
           N++ +   + +  ++NI+I  LCK   F  A+QLL+ M  +GL PD VT+ TL+    K+
Sbjct: 440 NQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKE 499

Query: 189 NNFEEVIEMHDYLVLRGVIPDTHTYESI 106
            N E  ++++D +V     P+   Y SI
Sbjct: 500 GNIESAVQVYDKMVKGEEKPNLLVYNSI 527


>ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335732|gb|EFH66149.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = -2

Query: 342 VNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSKKNNFEEVIEM 163
           V+ VTYNI+I  LCKFG +E AK++L +M+ +G+ PDS+TY TL+T+ SK    EEV+E+
Sbjct: 567 VSLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVEL 626

Query: 162 HDYLVLRGVIPDTHTYESI 106
           HDY++L+GV P  H Y+SI
Sbjct: 627 HDYMILQGVTPHEHIYQSI 645


>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = -2

Query: 372 FNEMRKTGFLVNKVTYNIMIKLLCKFGLFEHAKQLLSVMLSQGLTPDSVTYTTLLTNLSK 193
           F EM   G LVN V+YNIMI  LCK GL + A +L+  M SQG+ PD +TYTTL+TN  +
Sbjct: 554 FLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVE 613

Query: 192 KNNFEEVIEMHDYLVLRGVIPDTHTYES 109
               ++VIE+HDY+VL+G +PD  TY S
Sbjct: 614 ICGSKDVIELHDYMVLKGAVPDRKTYRS 641


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