BLASTX nr result

ID: Scutellaria22_contig00033982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033982
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]    95   7e-18
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arab...    76   3e-12
ref|NP_567220.1| pentatricopeptide repeat-containing protein [Ar...    76   3e-12
gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thal...    76   3e-12

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/95 (50%), Positives = 64/95 (67%)
 Frame = +2

Query: 5   SYLLMLLALSKMENKESLEKIFIEWKEGCTTYDFRIPNVLLEYYLGQNMIAEATSLYKTM 184
           SYL+MLLALSK+ +   LEK F EW+ GC+TYD R+ NV+LE YL + MI EA  L +++
Sbjct: 306 SYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESI 365

Query: 185 EGRADTPNLRALNLFTILCIKNGQTDLALKYLEMG 289
             R     L+ L+LF    +K  Q DLA+KYL+MG
Sbjct: 366 AKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMG 400


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/95 (49%), Positives = 64/95 (67%)
 Frame = +2

Query: 5   SYLLMLLALSKMENKESLEKIFIEWKEGCTTYDFRIPNVLLEYYLGQNMIAEATSLYKTM 184
           SYL+MLLALSK+ +   LEK F EW+ GC+TYD R+ NV+LE YL + +I EA  L +++
Sbjct: 310 SYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESI 369

Query: 185 EGRADTPNLRALNLFTILCIKNGQTDLALKYLEMG 289
             R     L+ L+LF    +K  Q DLA+KYL+MG
Sbjct: 370 AKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMG 404


>ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
           lyrata] gi|297318697|gb|EFH49119.1| hypothetical protein
           ARALYDRAFT_490379 [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = +2

Query: 2   TSYLLMLLALSKMENKESLEKIFIEWKEGCTTYDFRIPNVLLEYYLGQNMIAEATSLYKT 181
           +SYL ML ALSK+ + + ++KIF EW+  C TYD R+ NV +  YL QNM  EA +++  
Sbjct: 315 SSYLTMLQALSKLNDIDGIKKIFTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNG 374

Query: 182 MEGRADTPNLRALNLFTILCIKNGQTDLALKYLE 283
              +      +A  L  +  +KN Q DLALK+ E
Sbjct: 375 AMTKCKGQFSKARQLLMMHLLKNDQADLALKHFE 408


>ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01990, mitochondrial; Flags: Precursor
           gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26
           [Arabidopsis thaliana] gi|16323354|gb|AAL15390.1|
           AT4g01990/T7B11_26 [Arabidopsis thaliana]
           gi|332656708|gb|AEE82108.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 502

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +2

Query: 2   TSYLLMLLALSKMENKESLEKIFIEWKEGCTTYDFRIPNVLLEYYLGQNMIAEATSLYKT 181
           +SYL ML ALSK+++ + ++K+F EW+  C TYD R+ NV +  YL QNM  EA +++  
Sbjct: 317 SSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNG 376

Query: 182 MEGRADTPNLRALNLFTILCIKNGQTDLALKYLE 283
              +      +A  L  +  +KN Q DLALK+ E
Sbjct: 377 AMKKCKGQFSKARQLLMMHLLKNDQADLALKHFE 410


>gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
           gi|7268583|emb|CAB80692.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 501

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +2

Query: 2   TSYLLMLLALSKMENKESLEKIFIEWKEGCTTYDFRIPNVLLEYYLGQNMIAEATSLYKT 181
           +SYL ML ALSK+++ + ++K+F EW+  C TYD R+ NV +  YL QNM  EA +++  
Sbjct: 316 SSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNG 375

Query: 182 MEGRADTPNLRALNLFTILCIKNGQTDLALKYLE 283
              +      +A  L  +  +KN Q DLALK+ E
Sbjct: 376 AMKKCKGQFSKARQLLMMHLLKNDQADLALKHFE 409


Top