BLASTX nr result

ID: Scutellaria22_contig00033775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033775
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...    71   8e-11
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...    69   5e-10
ref|XP_002865608.1| binding protein [Arabidopsis lyrata subsp. l...    67   2e-09
ref|NP_199623.2| armadillo/beta-catenin-like repeats-containing ...    66   3e-09
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...    64   2e-08

>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/100 (36%), Positives = 51/100 (51%)
 Frame = +2

Query: 29  MGDSIQWIKHIELYXXXXXXXXXXXXXXXXIAXXXXXXXXXXXXXVREMEMYLTTTDIII 208
           M ++ Q  +HIE Y                +A             VRE+EMYLTTTD ++
Sbjct: 1   MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60

Query: 209 RSRGVXXXXXXXXXXXXKPFSTSSIHSLIGFFTERLADWR 328
           R+RG+            KP ++++IHSL+GFF +RLADWR
Sbjct: 61  RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWR 100


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = +2

Query: 164 VREMEMYLTTTDIIIRSRGVXXXXXXXXXXXXKPFSTSSIHSLIGFFTERLADWR 328
           V+EMEMYLTTTD IIR+RG+            KP   ++IHSLI FFTERLADWR
Sbjct: 46  VKEMEMYLTTTDDIIRARGILLLGEALSHLSSKPLDNTTIHSLIAFFTERLADWR 100


>ref|XP_002865608.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311443|gb|EFH41867.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1127

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +2

Query: 164 VREMEMYLTTTDIIIRSRGVXXXXXXXXXXXXKPFSTSSIHSLIGFFTERLADWR 328
           VREMEMYLTTTD ++R+RG+            KP + + +H+L+GFFTE+LADWR
Sbjct: 46  VREMEMYLTTTDNVVRARGILLLAEILDCLKAKPLNDTIVHTLVGFFTEKLADWR 100


>ref|NP_199623.2| armadillo/beta-catenin-like repeats-containing protein [Arabidopsis
           thaliana] gi|110741897|dbj|BAE98890.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332008238|gb|AED95621.1| armadillo/beta-catenin-like
           repeats-containing protein [Arabidopsis thaliana]
          Length = 1134

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/95 (34%), Positives = 48/95 (50%)
 Frame = +2

Query: 44  QWIKHIELYXXXXXXXXXXXXXXXXIAXXXXXXXXXXXXXVREMEMYLTTTDIIIRSRGV 223
           Q ++H+E +                IA             VREMEMYLTTTD ++R+RG+
Sbjct: 7   QLVQHLETFVDTNRSSSQQDDSLKAIASSLENDSLSITQLVREMEMYLTTTDNLVRARGI 66

Query: 224 XXXXXXXXXXXXKPFSTSSIHSLIGFFTERLADWR 328
                       KP + + +H+L+GFF+E+LADWR
Sbjct: 67  LLLAEILDCLKAKPLNDTIVHTLVGFFSEKLADWR 101


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Cucumis sativus]
          Length = 1147

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 36/55 (65%)
 Frame = +2

Query: 164 VREMEMYLTTTDIIIRSRGVXXXXXXXXXXXXKPFSTSSIHSLIGFFTERLADWR 328
           VREM MYLT TD IIR RG+            KP  +++IHSLI FFTERLADW+
Sbjct: 46  VREMGMYLTITDNIIRGRGILLLGELLACLASKPLDSATIHSLIAFFTERLADWK 100


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