BLASTX nr result

ID: Scutellaria22_contig00033515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033515
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   172   3e-41
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   169   2e-40

>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  183 bits (464), Expect = 1e-44
 Identities = 92/130 (70%), Positives = 110/130 (84%)
 Frame = +2

Query: 2   RDISLGERVVEHLVELKAQEAGDYILLLNIYSSHGNSEKVIEVRKMMKEKGIQTTPTSST 181
           R++ LGE VVEHL+ELKAQEAGDY+LL N+YSS  N +KV E+RK MKEKGIQTTP SS+
Sbjct: 310 RNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPASSS 369

Query: 182 IELKGKVHEFLADDTSHPRKKEIYEMLGEINQQLRMAGYVAEITSESQNMEGKSDMYAVL 361
           IELKGKVHEF+ DD SHP+K EIYEML EI++QL++AGYVAEITSE  N++ +   Y VL
Sbjct: 370 IELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRY-VL 428

Query: 362 SYHSEKLAMA 391
           SYHSEKLA+A
Sbjct: 429 SYHSEKLAIA 438


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/129 (65%), Positives = 102/129 (79%)
 Frame = +2

Query: 5   DISLGERVVEHLVELKAQEAGDYILLLNIYSSHGNSEKVIEVRKMMKEKGIQTTPTSSTI 184
           D+ LGERV+ HL+ELKA+EAGDY+LLLN YS+ G  EKV E+R +MKEK I T P  S I
Sbjct: 402 DVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461

Query: 185 ELKGKVHEFLADDTSHPRKKEIYEMLGEINQQLRMAGYVAEITSESQNMEGKSDMYAVLS 364
           EL+G VHEF+ DD SHPRK+EIY+ML EINQQL++AGYVAEITSE  N+E + +    L 
Sbjct: 462 ELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALR 521

Query: 365 YHSEKLAMA 391
           YHSEKLA+A
Sbjct: 522 YHSEKLAIA 530


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/128 (68%), Positives = 103/128 (80%)
 Frame = +2

Query: 8   ISLGERVVEHLVELKAQEAGDYILLLNIYSSHGNSEKVIEVRKMMKEKGIQTTPTSSTIE 187
           ++LGERV+ HL+ELKAQEAGDY+LLLNIYSS G+ EKV EVRK+MK K IQTTP  STIE
Sbjct: 392 VTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIE 451

Query: 188 LKGKVHEFLADDTSHPRKKEIYEMLGEINQQLRMAGYVAEITSESQNMEGKSDMYAVLSY 367
           LKG VHEF+ DD SH R +EIYE L EIN QLR+AGYV E++SE   M+ K   Y VLS+
Sbjct: 452 LKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMDDKEKGY-VLSH 510

Query: 368 HSEKLAMA 391
           HSEKLA+A
Sbjct: 511 HSEKLAVA 518


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  171 bits (433), Expect = 6e-41
 Identities = 88/130 (67%), Positives = 105/130 (80%)
 Frame = +2

Query: 2   RDISLGERVVEHLVELKAQEAGDYILLLNIYSSHGNSEKVIEVRKMMKEKGIQTTPTSST 181
           R  +LGERV+ HL+ELKAQEAGDY+LLLNIYSS GN +KV ++RK MKEKGIQT+P  ST
Sbjct: 454 RHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCST 513

Query: 182 IELKGKVHEFLADDTSHPRKKEIYEMLGEINQQLRMAGYVAEITSESQNMEGKSDMYAVL 361
           IELKGKVHEF+ DD  HPR  EIYEML EI +QL++AGYVAE++SE  N+ G  +    L
Sbjct: 514 IELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNL-GAEEKGNRL 572

Query: 362 SYHSEKLAMA 391
           SYHSEKLA+A
Sbjct: 573 SYHSEKLAIA 582


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = +2

Query: 5   DISLGERVVEHLVELKAQEAGDYILLLNIYSSHGNSEKVIEVRKMMKEKGIQTTPTSSTI 184
           ++ LGERV+ HL+E KA+EAGDY+LLLN YSS G  EKV E+R +MK+K IQT P  S I
Sbjct: 402 NVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAI 461

Query: 185 ELKGKVHEFLADDTSHPRKKEIYEMLGEINQQLRMAGYVAEITSESQNMEGKSDMYAVLS 364
           EL+G VHEF+ DD SHPRK+EIY+ML EINQQL++AGYVAEITSE  N++ + +    L 
Sbjct: 462 ELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYALR 521

Query: 365 YHSEKLAMA 391
           YHSEKLA+A
Sbjct: 522 YHSEKLAIA 530


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