BLASTX nr result

ID: Scutellaria22_contig00033447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033447
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-...   112   4e-23
emb|CBI15355.3| unnamed protein product [Vitis vinifera]              112   4e-23
emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]   112   4e-23
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [...   108   6e-22
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
          Length = 527

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/130 (48%), Positives = 77/130 (59%)
 Frame = +2

Query: 29  MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXXSLKSSIL 208
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 209 DKEPIHRVVSXXXXXXXXXXDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 388
           DKE +HRVVS          + P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 389 KLPIHGDASA 418
           +L IHGDASA
Sbjct: 118 RLAIHGDASA 127


>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/130 (48%), Positives = 77/130 (59%)
 Frame = +2

Query: 29  MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXXSLKSSIL 208
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 209 DKEPIHRVVSXXXXXXXXXXDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 388
           DKE +HRVVS          + P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 389 KLPIHGDASA 418
           +L IHGDASA
Sbjct: 118 RLAIHGDASA 127


>emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]
          Length = 539

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/130 (48%), Positives = 77/130 (59%)
 Frame = +2

Query: 29  MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXXSLKSSIL 208
           M +  R KVQRKF +RGYT+K+EAL EI  FLS F                  SLKSSIL
Sbjct: 1   MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60

Query: 209 DKEPIHRVVSXXXXXXXXXXDCPTTSGYGSAASALKIIDGFDVPKLRYDPIKKLFHKYSG 388
           DKE +HRVVS          + P   G  S  SAL+I+D F + K  YDPIKK+F++ +G
Sbjct: 61  DKESVHRVVSLLLEAEAAVEETP---GAISTRSALRIVDAFLMSKFCYDPIKKIFYENTG 117

Query: 389 KLPIHGDASA 418
           +L IHGDASA
Sbjct: 118 RLAIHGDASA 127


>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
           gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
           subunit B, putative [Ricinus communis]
          Length = 536

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
 Frame = +2

Query: 32  NSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXXSLK----S 199
           N  +R KVQ+KF +RGYT+K++AL EI  F++RF G                S K    S
Sbjct: 3   NLTIRKKVQKKFKVRGYTLKVDALDEILPFVNRFQGAEDDAIDVLLDRLQSESQKVGVRS 62

Query: 200 SILDKEPIHRVVSXXXXXXXXXXDCPTTS-GYGSAASALKIIDGFDVPKLRYDPIKKLFH 376
           SI+DKEPI RV+S          + P+ S    S++SA++++D F VPK R+DPIKK F+
Sbjct: 63  SIIDKEPIRRVISSLVEALDAVEEGPSESVSTSSSSSAIRVVDAFLVPKFRFDPIKKQFY 122

Query: 377 KYSGKLPIHGDASA 418
           +Y+G L IHGD+SA
Sbjct: 123 QYTGGLSIHGDSSA 136


>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
 Frame = +2

Query: 29  MNSVMRNKVQRKFSMRGYTIKIEALSEIFGFLSRFPGXXXXXXXXXXXXXXXXSLK---- 196
           M+S +R  +Q+KF +RGYT+KI+AL +I  F +RF G                S K    
Sbjct: 1   MSSTVRKLIQKKFKIRGYTLKIDALDQILSFTNRFLGAEDEALDLLLDHLQSQSQKLGVR 60

Query: 197 SSILDKEPIHRVVSXXXXXXXXXXDCPTTSG-YGSAASALKIIDGFDVPKLRYDPIKKLF 373
           SSILDKEP++R ++          +    +G   S+ SA+++ID F +PK RYDPIKK F
Sbjct: 61  SSILDKEPVNRAITALLEADDAVDEDFIANGAVSSSTSAIRVIDAFLIPKFRYDPIKKQF 120

Query: 374 HKYSGKLPIHGDASA 418
           H+++G L IHGDASA
Sbjct: 121 HEHTGGLHIHGDASA 135


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