BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033423
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865844.1| pseudouridine synthase family protein [Arabi...    55   5e-11
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...    52   5e-11
gb|AFK47408.1| unknown [Medicago truncatula]                           52   5e-11
ref|NP_001190513.1| RNA pseudourine synthase 7 [Arabidopsis thal...    55   7e-11
gb|AAM61068.1| unknown [Arabidopsis thaliana]                          55   7e-11

>ref|XP_002865844.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297311679|gb|EFH42103.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 392

 Score = 55.1 bits (131), Expect(2) = 5e-11
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   VHPCGQYRKNTVVGILQAEHELGSLFRI 84
           VHPCGQYRKNTVVGIL AEH+LG+LF I
Sbjct: 153 VHPCGQYRKNTVVGILDAEHDLGTLFPI 180



 Score = 37.0 bits (84), Expect(2) = 5e-11
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = +3

Query: 168 HILDFLKPAIHRLDRLVSGLLILARNATK 254
           H L  L P IHRLDRLVSGLLI+AR A K
Sbjct: 172 HDLGTLFP-IHRLDRLVSGLLIIARTAAK 199


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355491829|gb|AES73032.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 380

 Score = 52.0 bits (123), Expect(2) = 5e-11
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +1

Query: 1   VHPCGQYRKNTVVGILQAEHELGSLFRI 84
           VHPCGQYRKNTVVGILQAEH L  LF +
Sbjct: 137 VHPCGQYRKNTVVGILQAEHGLAPLFPV 164



 Score = 40.0 bits (92), Expect(2) = 5e-11
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +3

Query: 195 IHRLDRLVSGLLILARNATK 254
           +HRLDRLVSGLLI+ARNATK
Sbjct: 164 VHRLDRLVSGLLIIARNATK 183


>gb|AFK47408.1| unknown [Medicago truncatula]
          Length = 268

 Score = 52.0 bits (123), Expect(2) = 5e-11
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +1

Query: 1   VHPCGQYRKNTVVGILQAEHELGSLFRI 84
           VHPCGQYRKNTVVGILQAEH L  LF +
Sbjct: 25  VHPCGQYRKNTVVGILQAEHGLAPLFPV 52



 Score = 40.0 bits (92), Expect(2) = 5e-11
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +3

Query: 195 IHRLDRLVSGLLILARNATK 254
           +HRLDRLVSGLLI+ARNATK
Sbjct: 52  VHRLDRLVSGLLIIARNATK 71


>ref|NP_001190513.1| RNA pseudourine synthase 7 [Arabidopsis thaliana]
           gi|332008660|gb|AED96043.1| RNA pseudourine synthase 7
           [Arabidopsis thaliana]
          Length = 410

 Score = 54.7 bits (130), Expect(2) = 7e-11
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   VHPCGQYRKNTVVGILQAEHELGSLFRI 84
           VHPCGQYRKNT+VGIL AEH+LG+LF I
Sbjct: 156 VHPCGQYRKNTIVGILDAEHDLGTLFPI 183



 Score = 37.0 bits (84), Expect(2) = 7e-11
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = +3

Query: 168 HILDFLKPAIHRLDRLVSGLLILARNATK 254
           H L  L P IHRLDRLVSGLLI+AR A K
Sbjct: 175 HDLGTLFP-IHRLDRLVSGLLIIARTAAK 202


>gb|AAM61068.1| unknown [Arabidopsis thaliana]
          Length = 395

 Score = 55.1 bits (131), Expect(2) = 7e-11
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   VHPCGQYRKNTVVGILQAEHELGSLFRI 84
           VHPCGQYRKNT+VGIL AEH+LG+LF I
Sbjct: 156 VHPCGQYRKNTIVGILDAEHDLGTLFSI 183



 Score = 36.6 bits (83), Expect(2) = 7e-11
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +3

Query: 192 AIHRLDRLVSGLLILARNATK 254
           +IHRLDRLVSGLLI+AR A K
Sbjct: 182 SIHRLDRLVSGLLIIARTAAK 202