BLASTX nr result

ID: Scutellaria22_contig00033361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033361
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...    91   1e-16
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]    91   1e-16
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...    77   2e-12

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = -2

Query: 251 EDDVLGPDTPGMRPLVPRLKRVQEDLCNFEKNTDFFSTPDNRKRPKLQQASSVLKNNHDE 72
           +DD++GP+TPGMRP VPRLKR+QED  NFE N +  S  D+ KR KL Q S+    N+ E
Sbjct: 177 DDDIIGPETPGMRPFVPRLKRIQED--NFE-NKNECSLLDSSKRLKLLQNSTTGNKNYGE 233

Query: 71  DSDTISKFEWLHPSRIKDGNGRK 3
            SDT SKFEWL PSR +D N R+
Sbjct: 234 VSDTTSKFEWLDPSRKRDANRRR 256


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = -2

Query: 251 EDDVLGPDTPGMRPLVPRLKRVQEDLCNFEKNTDFFSTPDNRKRPKLQQASSVLKNNHDE 72
           +DD++GP+TPGMRP VPRLKR+QED  NFE N +  S  D+ KR KL Q S+    N+ E
Sbjct: 175 DDDIIGPETPGMRPFVPRLKRIQED--NFE-NKNECSLLDSSKRLKLLQNSTTGNKNYGE 231

Query: 71  DSDTISKFEWLHPSRIKDGNGRK 3
            SDT SKFEWL PSR +D N R+
Sbjct: 232 VSDTTSKFEWLDPSRKRDANRRR 254


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/83 (57%), Positives = 59/83 (71%)
 Frame = -2

Query: 251 EDDVLGPDTPGMRPLVPRLKRVQEDLCNFEKNTDFFSTPDNRKRPKLQQASSVLKNNHDE 72
           +DD++GP+TPGMRP VPRLKR+QED  NFE N +  S  D+ KR KL Q S+    N+ E
Sbjct: 175 DDDIIGPETPGMRPFVPRLKRIQED--NFE-NKNECSLLDSSKRLKLLQNSTTGNKNYGE 231

Query: 71  DSDTISKFEWLHPSRIKDGNGRK 3
            SDT SKFEWL PSR +D N R+
Sbjct: 232 VSDTTSKFEWLDPSRKRDANRRR 254


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
 Frame = -2

Query: 293 SSEGNGGSSFLTTIE--DDVLGPDTPGMRPLVPRLKRVQEDLCNFE-KNTDFFSTPDNRK 123
           SS G    + +  IE  +DV GP TPGMRPLVPRLKR+ ED+  FE KN   F     R 
Sbjct: 147 SSSGMVDQTSVLNIESVNDVPGPHTPGMRPLVPRLKRILEDVPKFEDKNGCSFLNSSKRV 206

Query: 122 RPKLQQASSVLKNNHDEDSDTISKFEWLHPSRIKDGNGRK 3
           +P LQ  +S++K NH+E S++ SKFEWL P++I+D N R+
Sbjct: 207 KP-LQDPASLIK-NHEEISNSTSKFEWLDPAQIRDANRRR 244


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/83 (48%), Positives = 53/83 (63%)
 Frame = -2

Query: 251 EDDVLGPDTPGMRPLVPRLKRVQEDLCNFEKNTDFFSTPDNRKRPKLQQASSVLKNNHDE 72
           +DDV GP+TPG++PLVPRLKR+Q D    +     F   +  KR KL   S+ +  N  +
Sbjct: 151 DDDVPGPETPGVQPLVPRLKRIQHDSPKVDDKDATFLL-NASKRAKLLLDSTAVSKNQGQ 209

Query: 71  DSDTISKFEWLHPSRIKDGNGRK 3
            SD+ SKFEWL P RI+D NGR+
Sbjct: 210 ISDSTSKFEWLDPLRIRDINGRR 232


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