BLASTX nr result

ID: Scutellaria22_contig00033352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033352
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...    70   2e-10
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...    66   3e-09
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...    66   3e-09
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...    66   3e-09
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...    64   1e-08

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/68 (52%), Positives = 51/68 (75%)
 Frame = +1

Query: 106 EDDDQRVVDLVKELVQRLLCTSSHSNNQNPNASGPTQQEFNQAVKYSLRILSSRMTPSIA 285
           E+D Q+++DLVKELV RLL  S + N + PN S P   +F  A++Y++RILSSR+TPSI+
Sbjct: 3   EEDQQKIIDLVKELVHRLL--SQNPNFKTPN-SNPNSTDFQNALRYAVRILSSRLTPSIS 59

Query: 286 ADDSAMAE 309
            D +A+AE
Sbjct: 60  PDSAAIAE 67


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +1

Query: 106 EDDDQRVVDLVKELVQRLLCTSSHSNNQNPNASGPTQQEFNQAVKYSLRILSSRMTPSIA 285
           EDD  +V+DL+K+LV RLL   SH+   N   S PT  +F ++++Y++RIL+SRMTPSIA
Sbjct: 3   EDDSTKVLDLIKDLVLRLL---SHNPTSN---SSPTSSDFQKSLRYAIRILTSRMTPSIA 56

Query: 286 ADDSAMAE 309
            D +A+AE
Sbjct: 57  PDAAAIAE 64


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +1

Query: 106 EDDDQRVVDLVKELVQRLLCTSSHSNNQNPNASGPTQQEFNQAVKYSLRILSSRMTPSIA 285
           EDD  +V+DL+K+LV RLL   SH+   N   S PT  +F ++++Y++RIL+SRMTPSIA
Sbjct: 3   EDDSTKVLDLIKDLVLRLL---SHNPTSN---SSPTSSDFQKSLRYAIRILTSRMTPSIA 56

Query: 286 ADDSAMAE 309
            D +A+AE
Sbjct: 57  PDAAAIAE 64


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = +1

Query: 106 EDDDQRVVDLVKELVQRLLCTSSHSNNQNPNASGPTQQ--EFNQAVKYSLRILSSRMTPS 279
           EDD Q ++DLVKELV RLL  S +  N  P  S P     +F  +++Y++RILSSR+TPS
Sbjct: 5   EDDQQNILDLVKELVNRLL--SQNPQNPRPPISNPNPNSPDFQNSLRYAIRILSSRLTPS 62

Query: 280 IAADDSAMAE 309
           IA D +A+AE
Sbjct: 63  IAPDAAAIAE 72


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222867365|gb|EEF04496.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 844

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = +1

Query: 103 MEDDDQRVVDLVKELVQRLLCTSSHSNNQNPNASG--PTQQEFNQAVKYSLRILSSRMTP 276
           ME+D Q ++DLVKELV RLL  S +  N  P  S   P   +F  +++Y++RILSSR+TP
Sbjct: 1   MEEDQQTILDLVKELVNRLL--SQNPQNPKPPISNTTPNSPDFQNSLRYAIRILSSRLTP 58

Query: 277 SIAADDSAMAE 309
           SIA D  A++E
Sbjct: 59  SIAPDAVAISE 69


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