BLASTX nr result

ID: Scutellaria22_contig00033303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033303
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [M...   129   2e-28
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   129   3e-28
ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helica...   123   2e-26
ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
           predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/86 (74%), Positives = 71/86 (82%)
 Frame = -1

Query: 258 KRMGLYCEVYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRTIL 79
           +RMGLY E+YGKVVVASKVPLPNYR DLDDKRPQREVV+PLSLQRRVEGLLQEHLDR  L
Sbjct: 46  RRMGLYSELYGKVVVASKVPLPNYRSDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRAQL 105

Query: 78  KSEKAGDSLDKTESSNQAGNVDTAEN 1
           K+E  G S D  +S NQ G++   EN
Sbjct: 106 KAENVGGSADDAKSINQTGDISLDEN 131


>ref|XP_003638250.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504185|gb|AES85388.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 279

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/86 (74%), Positives = 72/86 (83%)
 Frame = -1

Query: 258 KRMGLYCEVYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRTIL 79
           KRMGLY E++GKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGL+QE+LDR  L
Sbjct: 120 KRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEYLDRLQL 179

Query: 78  KSEKAGDSLDKTESSNQAGNVDTAEN 1
            S K  DSLD   S+NQ  ++D  EN
Sbjct: 180 NSAKTTDSLDNLNSTNQIRDIDMDEN 205


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  129 bits (324), Expect = 3e-28
 Identities = 64/86 (74%), Positives = 72/86 (83%)
 Frame = -1

Query: 258 KRMGLYCEVYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRTIL 79
           KRMGLY E++GKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGLLQE+LDR  L
Sbjct: 134 KRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQL 193

Query: 78  KSEKAGDSLDKTESSNQAGNVDTAEN 1
            S K  DSLD   S+NQ  +++  EN
Sbjct: 194 NSAKTTDSLDDVNSTNQVKDINMDEN 219


>ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
           [Brachypodium distachyon]
          Length = 1121

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/85 (70%), Positives = 71/85 (83%)
 Frame = -1

Query: 258 KRMGLYCEVYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRTIL 79
           KRMGLY E+YGKV+VASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGL+QEHLDR +L
Sbjct: 119 KRMGLYSELYGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEHLDRALL 178

Query: 78  KSEKAGDSLDKTESSNQAGNVDTAE 4
             +K G  +++   S +A NV+  E
Sbjct: 179 PFDKGGSKIER--GSEKADNVNLDE 201


>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/85 (74%), Positives = 68/85 (80%)
 Frame = -1

Query: 255 RMGLYCEVYGKVVVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEHLDRTILK 76
           RMGLY E+YGKVVVASKVPLPNYRPDLDDKRPQREVV+PLSLQRRVEGLLQEHLDRT L 
Sbjct: 31  RMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRTQLS 90

Query: 75  SEKAGDSLDKTESSNQAGNVDTAEN 1
           + K G + D   S NQ  +    EN
Sbjct: 91  AGKVGGNADDA-SINQIEDTSPDEN 114


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