BLASTX nr result

ID: Scutellaria22_contig00033167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033167
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   148   5e-34
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   147   9e-34
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   147   1e-33
ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncat...   146   2e-33
sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1...   140   1e-31

>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = -2

Query: 258 LDPPIRKGQTLYPHVVMQFETDVVMDTTLSISEDLYNAKYKNKLELAHKGLTHEIFVTIL 79
           LDPPIRKGQTLYPH+VMQFETD V+D+ L+ISEDLYN+KYK+KLEL++KGL HE+F T+L
Sbjct: 269 LDPPIRKGQTLYPHIVMQFETDTVVDSELAISEDLYNSKYKDKLELSYKGLIHEVFTTVL 328

Query: 78  RGLSGAKVTKPGKFRSDQDGYAVKSS 1
           RGLSG KVTKPG FRS QDGYAVKSS
Sbjct: 329 RGLSGGKVTKPGNFRSCQDGYAVKSS 354


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = -2

Query: 258 LDPPIRKGQTLYPHVVMQFETDVVMDTTLSISEDLYNAKYKNKLELAHKGLTHEIFVTIL 79
           LDPPIRKGQTLYPH+VMQFETD V+++ L+I+EDLYN KYK+KL+L++KGL HE+F TIL
Sbjct: 269 LDPPIRKGQTLYPHIVMQFETDYVVESELAINEDLYNTKYKDKLDLSYKGLIHEVFTTIL 328

Query: 78  RGLSGAKVTKPGKFRSDQDGYAVKSS 1
           RGLSGAKVTKPGKFRS QDGYAVKSS
Sbjct: 329 RGLSGAKVTKPGKFRSCQDGYAVKSS 354


>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = -2

Query: 258 LDPPIRKGQTLYPHVVMQFETDVVMDTTLSISEDLYNAKYKNKLELAHKGLTHEIFVTIL 79
           LDPPIRKGQTLYPH+VMQFETD V+++ L+I+EDLYN K+K+KLEL++KGL HE+F TIL
Sbjct: 269 LDPPIRKGQTLYPHIVMQFETDYVVESELAINEDLYNTKFKDKLELSYKGLIHEVFTTIL 328

Query: 78  RGLSGAKVTKPGKFRSDQDGYAVKSS 1
           RGLSGAKVTKPGKFRS QDGYAVKSS
Sbjct: 329 RGLSGAKVTKPGKFRSCQDGYAVKSS 354


>ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
           gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1
           [Medicago truncatula]
          Length = 648

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/86 (77%), Positives = 81/86 (94%)
 Frame = -2

Query: 258 LDPPIRKGQTLYPHVVMQFETDVVMDTTLSISEDLYNAKYKNKLELAHKGLTHEIFVTIL 79
           LDPPIRKGQTLYPH+VMQFETD V+++ L++SEDLYN+K+K++LEL++KGL HE+F T+L
Sbjct: 269 LDPPIRKGQTLYPHIVMQFETDYVVESELALSEDLYNSKFKDRLELSYKGLIHEVFTTVL 328

Query: 78  RGLSGAKVTKPGKFRSDQDGYAVKSS 1
           RGLSGAKVTKPGKFRS QDGYAVKSS
Sbjct: 329 RGLSGAKVTKPGKFRSCQDGYAVKSS 354


>sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|433872|emb|CAA82251.1| HMG protein [Catharanthus
           roseus]
          Length = 639

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = -2

Query: 258 LDPPIRKGQTLYPHVVMQFETDVVMDTTLSISEDLYNAKYKNKLELAHKGLTHEIFVTIL 79
           LDPPIRKGQTLYPH+V+QFETD V+D++LSISEDL + KYK+KLE  +KGL HE+F  IL
Sbjct: 269 LDPPIRKGQTLYPHIVLQFETDYVVDSSLSISEDLLSTKYKDKLEPTYKGLIHEVFTMIL 328

Query: 78  RGLSGAKVTKPGKFRSDQDGYAVKSS 1
           RGLSGAKVT+PGKFRS QDGYAVKSS
Sbjct: 329 RGLSGAKVTRPGKFRSCQDGYAVKSS 354


Top