BLASTX nr result

ID: Scutellaria22_contig00033006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00033006
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30

>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/78 (78%), Positives = 70/78 (89%)
 Frame = -3

Query: 410 EEKQRLLLGHSEKLAVAFGLINCSKGETIRVTKNLRLCEDCHTFITFISKFTNREILVRD 231
           EEK+R++LGHSEKLAVAFGLIN SKG+TIR+TKNLRLCEDCH+   FISKF +REI+VRD
Sbjct: 572 EEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD 631

Query: 230 VNRFHHFKDGECSCKGYW 177
           +NRFHHFKDG CSC  YW
Sbjct: 632 LNRFHHFKDGVCSCGDYW 649


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/78 (80%), Positives = 67/78 (85%)
 Frame = -3

Query: 410 EEKQRLLLGHSEKLAVAFGLINCSKGETIRVTKNLRLCEDCHTFITFISKFTNREILVRD 231
           EEK+R++LGHSEKLAVAFGLIN  KGETIR+ KNLRLCEDCH    FISKF NREILVRD
Sbjct: 581 EEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRD 640

Query: 230 VNRFHHFKDGECSCKGYW 177
           VNRFHHFKDG CSC  YW
Sbjct: 641 VNRFHHFKDGVCSCGDYW 658


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = -3

Query: 410 EEKQRLLLGHSEKLAVAFGLINCSKGETIRVTKNLRLCEDCHTFITFISKFTNREILVRD 231
           EEK+R++LGHSEKLAVAFGLIN +KGETIR+ KNLRLCEDCH    FISKF NREILVRD
Sbjct: 581 EEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRD 640

Query: 230 VNRFHHFKDGECSCKGYW 177
           VNRFHHF+DG CSC  YW
Sbjct: 641 VNRFHHFRDGVCSCGDYW 658


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/77 (79%), Positives = 69/77 (89%)
 Frame = -3

Query: 407 EKQRLLLGHSEKLAVAFGLINCSKGETIRVTKNLRLCEDCHTFITFISKFTNREILVRDV 228
           EK+R++LGHSEKLAVAFGLIN SKGE IR+TK+LRLCEDCH+F  FISKF N+EILVRDV
Sbjct: 574 EKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDV 633

Query: 227 NRFHHFKDGECSCKGYW 177
           NRFHHF+DG CSC  YW
Sbjct: 634 NRFHHFRDGVCSCGDYW 650


>ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = -3

Query: 410 EEKQRLLLGHSEKLAVAFGLINCSKGETIRVTKNLRLCEDCHTFITFISKFTNREILVRD 231
           EEK+R+L+GHSEKLAVAFGLIN   GE IR+TKNLRLCEDCH+   FISKFT REI+VRD
Sbjct: 577 EEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRD 636

Query: 230 VNRFHHFKDGECSCKGYW 177
           VNRFHHF+DG CSC  YW
Sbjct: 637 VNRFHHFRDGVCSCGDYW 654


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