BLASTX nr result

ID: Scutellaria22_contig00032323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032323
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
emb|CBI35592.3| unnamed protein product [Vitis vinifera]               83   3e-14
emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]    83   3e-14
ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06
ref|NP_193742.1| pentatricopeptide repeat-containing protein [Ar...    54   1e-05

>ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
            mitochondrial [Vitis vinifera]
          Length = 876

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = -1

Query: 483  ISQLCKSDDYTRAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAG 304
            I   CK+  Y    E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G
Sbjct: 774  IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 833

Query: 303  VEDHSAILPYINFLVKREE--PCRSFEFLSFIEKRGYNERPIV 181
            +E+   + P I FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 834  IEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 876


>emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = -1

Query: 483  ISQLCKSDDYTRAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAG 304
            I   CK+  Y    E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G
Sbjct: 781  IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 840

Query: 303  VEDHSAILPYINFLVKREE--PCRSFEFLSFIEKRGYNERPIV 181
            +E+   + P I FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 841  IEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 883


>emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = -1

Query: 483  ISQLCKSDDYTRAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAG 304
            I   CK+  Y    E++K  + +  VPSF+SY  VI GL+NEGR QEA+ L+SDL+   G
Sbjct: 731  IEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTG 790

Query: 303  VEDHSAILPYINFLVKREE--PCRSFEFLSFIEKRGYNERPIV 181
            +E+   + P I FL+K EE  P +  + +  IE+  Y ERPI+
Sbjct: 791  IEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPII 833


>ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/87 (34%), Positives = 45/87 (51%)
 Frame = -1

Query: 483 ISQLCKSDDYTRAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAG 304
           I+ LC +     A E   + V HGC+P+  +YSS+I  L  EGR +EAE + S+L     
Sbjct: 617 INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676

Query: 303 VEDHSAILPYINFLVKREEPCRSFEFL 223
           + D    +  I   V   +  R+F+FL
Sbjct: 677 IPDEVTYVKMIEVCVMSGKVDRAFDFL 703


>ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098720|sp|O49436.1|PP327_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
           gi|2827663|emb|CAA16617.1| membrane-associated
           salt-inducible-like protein [Arabidopsis thaliana]
           gi|7268804|emb|CAB79009.1| membrane-associated
           salt-inducible-like protein [Arabidopsis thaliana]
           gi|58013024|gb|AAW62965.1| embryo-defective 1025
           [Arabidopsis thaliana] gi|332658871|gb|AEE84271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/96 (32%), Positives = 51/96 (53%)
 Frame = -1

Query: 483 ISQLCKSDDYTRAQEWIKRFVGHGCVPSFSSYSSVIVGLQNEGRFQEAELLISDLLSSAG 304
           I  LCK  D TR  + +      GCVP+  +Y+++I GL  +G+  +A  L+  ++SS  
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323

Query: 303 VEDHSAILPYINFLVKREEPCRSFEFLSFIEKRGYN 196
           + +       IN LVK+     +   LS +E+RGY+
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359


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