BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00032199
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974372.1| basic helix-loop-helix (bHLH) DNA-binding famil...    86   2e-15
ref|XP_002877136.1| transcription regulator [Arabidopsis lyrata ...    86   3e-15
gb|AAM67002.1| DNA-binding protein-like [Arabidopsis thaliana]         84   1e-14
ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|...    83   2e-14
ref|NP_001049114.1| Os03g0171700 [Oryza sativa Japonica Group] g...    83   2e-14

>ref|NP_974372.1| basic helix-loop-helix (bHLH) DNA-binding family protein
           [Arabidopsis thaliana] gi|9294226|dbj|BAB02128.1|
           DNA-binding protein-like [Arabidopsis thaliana]
           gi|88900306|gb|ABD57465.1| At3g28857 [Arabidopsis
           thaliana] gi|332643976|gb|AEE77497.1| basic
           helix-loop-helix (bHLH) DNA-binding family protein
           [Arabidopsis thaliana]
          Length = 92

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +3

Query: 78  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 254
           +R+ +  SR S D++ DL+ KL+ FLP+ +   R DK    S+SKVL+ETC YI+KL +E
Sbjct: 6   SRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDK---VSASKVLQETCNYIRKLHRE 62

Query: 255 VDNLSDRLSQLVDSEDINGSDADIIRRLL 341
           VDNLSDRLSQL+DS D +  +A +IR LL
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91


>ref|XP_002877136.1| transcription regulator [Arabidopsis lyrata subsp. lyrata]
           gi|297322974|gb|EFH53395.1| transcription regulator
           [Arabidopsis lyrata subsp. lyrata]
          Length = 92

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
 Frame = +3

Query: 78  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 254
           +R+++  SR S D++ DL+ KL+ FLP+     R DK    S+SKVL+ETC YI+KL +E
Sbjct: 6   SRQSSSASRISDDQMIDLVSKLRQFLPEIQERRRSDK---VSASKVLQETCNYIRKLHRE 62

Query: 255 VDNLSDRLSQLVDSEDINGSDADIIRRLL 341
           VDNLSDRLSQL+DS D +  +A +IR LL
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91


>gb|AAM67002.1| DNA-binding protein-like [Arabidopsis thaliana]
          Length = 92

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
 Frame = +3

Query: 78  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 254
           +R+ +  SR S D++ DL+ KL+ FLP+ +   R DK    S+S VL+ETC YI+KL +E
Sbjct: 6   SRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDK---VSASXVLQETCNYIRKLHRE 62

Query: 255 VDNLSDRLSQLVDSEDINGSDADIIRRLL 341
           VDNLSDRLSQL+DS D +  +A +IR LL
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIRSLL 91


>ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|gb|ACG47390.1| DNA
           binding protein [Zea mays] gi|223944863|gb|ACN26515.1|
           unknown [Zea mays] gi|413924559|gb|AFW64491.1| putative
           HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 90

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/91 (48%), Positives = 62/91 (68%)
 Frame = +3

Query: 72  MPNRRATRVSRFSQDELNDLIFKLQAFLPDNSTSRCDKNMAYSSSKVLKETCKYIKKLQK 251
           M +RR++     S+DE+N+L+ KLQA LP +   R       S++K+LKETC YIK LQ+
Sbjct: 1   MSSRRSSSHGNISEDEMNELVSKLQALLPSSRRRRGSGQA--STAKLLKETCSYIKSLQR 58

Query: 252 EVDNLSDRLSQLVDSEDINGSDADIIRRLLK 344
           EVD+LSDRLS L+ + D N   A+IIR +L+
Sbjct: 59  EVDDLSDRLSDLLSTMDHNSPAAEIIRSILR 89


>ref|NP_001049114.1| Os03g0171700 [Oryza sativa Japonica Group]
           gi|108706426|gb|ABF94221.1| bHLH family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113547585|dbj|BAF11028.1| Os03g0171700 [Oryza sativa
           Japonica Group] gi|125542586|gb|EAY88725.1| hypothetical
           protein OsI_10202 [Oryza sativa Indica Group]
           gi|125585087|gb|EAZ25751.1| hypothetical protein
           OsJ_09590 [Oryza sativa Japonica Group]
           gi|215768855|dbj|BAH01084.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 91

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/81 (54%), Positives = 59/81 (72%)
 Frame = +3

Query: 102 RFSQDELNDLIFKLQAFLPDNSTSRCDKNMAYSSSKVLKETCKYIKKLQKEVDNLSDRLS 281
           R + +E+N+LI KLQA LP++S SR       S+SK+LKETC YIK L +EVD+LSDRLS
Sbjct: 13  RITDEEINELISKLQALLPESSRSRGASRS--SASKLLKETCSYIKSLHREVDDLSDRLS 70

Query: 282 QLVDSEDINGSDADIIRRLLK 344
           +L+ + D N   A+IIR LL+
Sbjct: 71  ELMSTMDNNSPQAEIIRSLLR 91