BLASTX nr result
ID: Scutellaria22_contig00031096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00031096
(1164 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 539 e-151
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 524 e-146
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2... 503 e-140
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 499 e-139
ref|NP_180537.1| pentatricopeptide repeat-containing protein [Ar... 469 e-130
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 539 bits (1389), Expect = e-151
Identities = 251/387 (64%), Positives = 317/387 (81%)
Frame = -3
Query: 1162 FAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVF 983
FA HP +++I++CS + QLKQIHAQMLR GLFFDPFSAS+LI ++ALS F SL+YA +VF
Sbjct: 33 FANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVF 92
Query: 982 DQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDL 803
DQIP PNLY+WN LIRAYA++S P L +F R+L++ + P+KFT+PF+IKA++++ +L
Sbjct: 93 DQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEEL 152
Query: 802 QLGKGIHGMAIKEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGL 623
GK HGM IK GSD+F+ N L+HFYA+CG + RVF +IP RDV+SWNSMI
Sbjct: 153 FTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAF 212
Query: 622 AQNGSVEDAVEFFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKNGIKLSL 443
Q G E+A+E F ME ++VKPN +TMVGVL+AC KK D EFGRW+H YIE+N I SL
Sbjct: 213 VQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL 272
Query: 442 ILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEAARDLFDSMPSK 263
L NA+LDMY KCGS++DAKRLFD+M EKDIVSWTTML GYA +G+++AA+ +FD+MP++
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332
Query: 262 DIAAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACSELGAIDMGSWI 83
DIAAWN+LISAYEQ G PKEA+ +F+ELQLSKTAKPDEVTLVSTLSAC++LGA+D+G WI
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392
Query: 82 HVYIKKEGIKLNCHLATALIDMYSKCG 2
HVYIKK+G+KLNCHL T+LIDMY KCG
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCG 419
Score = 175 bits (444), Expect = 2e-41
Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 32/370 (8%)
Frame = -3
Query: 1105 KQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYA 926
K H +++ L D F + LI A + L ++VF IP ++ SWN +I A+
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYA--KCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213
Query: 925 TASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKEGYGSDI 746
P + L +F + + + +PN T V+ A AK D + G+ +H + G +
Sbjct: 214 QGGCPEEALELFQEMETQ-NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL 272
Query: 745 FVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLA------------------ 620
+SN ++ Y +CG + A R+F +PE+D++SW +M+ G A
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332
Query: 619 -------------QNGSVEDAVEFFHRME-GESVKPNDVTMVGVLTACRKKLDLEFGRWI 482
Q G ++A+E FH ++ ++ KP++VT+V L+AC + ++ G WI
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392
Query: 481 HDYIEKNGIKLSLILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDF 302
H YI+K G+KL+ L +L+DMY KCG +Q A +F + KD+ W+ M+AG A
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLA----- 447
Query: 301 EAARDLFDSMPSKDIAAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSA 122
G+ K+AIA+F+++Q K KP+ VT + L A
Sbjct: 448 --------------------------MHGHGKDAIALFSKMQEDK-VKPNAVTFTNILCA 480
Query: 121 CSELGAIDMG 92
CS +G ++ G
Sbjct: 481 CSHVGLVEEG 490
Score = 120 bits (302), Expect = 5e-25
Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 1/256 (0%)
Frame = -3
Query: 1129 KCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSW 950
KC S K++ +M + + L+ + + E+ + A +FD +P ++ +W
Sbjct: 284 KCGSVEDAKRLFDKMPEKDIVS---WTTMLVGYAKIGEYDA---AQGIFDAMPNQDIAAW 337
Query: 949 NVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAI 770
N LI AY +P + L +F L +P++ T + A A++G + LG IH
Sbjct: 338 NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397
Query: 769 KEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGSVEDAVE 590
K+G + ++ L+ Y +CG A VF+S+ +DV W++MI GLA +G +DA+
Sbjct: 398 KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIA 457
Query: 589 FFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIE-KNGIKLSLILCNALLDMY 413
F +M+ + VKPN VT +L AC +E GR + +E G+ + ++D+
Sbjct: 458 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 517
Query: 412 AKCGSMQDAKRLFDEM 365
+ G +++A L ++M
Sbjct: 518 GRAGLLEEAVELIEKM 533
>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 524 bits (1350), Expect = e-146
Identities = 246/387 (63%), Positives = 312/387 (80%)
Frame = -3
Query: 1162 FAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVF 983
F H ++ I+KCSSS QLK++HA+MLR GLFFDPFSASKL +SALS FS+L+YA +F
Sbjct: 23 FRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLF 82
Query: 982 DQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDL 803
DQIP+PNLY+WN LIRAYA++S P +F LL++C++ PNKFT+PFVIKA++++
Sbjct: 83 DQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKAS 142
Query: 802 QLGKGIHGMAIKEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGL 623
++G +HGMAIK +G D+++ N LV FY CG MA R+F I +DV+SWNSMI+
Sbjct: 143 RVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAF 202
Query: 622 AQNGSVEDAVEFFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKNGIKLSL 443
AQ EDA+E F +ME E+V PN VTMVGVL+AC KKLDLEFGRW+ YIE+ GIK+ L
Sbjct: 203 AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262
Query: 442 ILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEAARDLFDSMPSK 263
LCNA+LDMY KCGS+ DA++LFDEM E+D+ SWT ML GYA +GD++AAR +F++MP K
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK 322
Query: 262 DIAAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACSELGAIDMGSWI 83
+IAAWN LISAYEQ+G PKEA+A+FNELQLSK AKPDEVTLVSTLSAC++LGAID+G WI
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382
Query: 82 HVYIKKEGIKLNCHLATALIDMYSKCG 2
HVYIK+EGI LNCHL ++L+DMY+KCG
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCG 409
Score = 163 bits (412), Expect = 9e-38
Identities = 110/399 (27%), Positives = 184/399 (46%), Gaps = 33/399 (8%)
Frame = -3
Query: 1099 IHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATA 920
+H ++ D + + L++ L A ++F I ++ SWN +I A+A
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGAC--GDLSMAERLFKGISCKDVVSWNSMISAFAQG 205
Query: 919 SQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKEGYGSDIFV 740
+ P D L +F ++ E + PN T V+ A AK DL+ G+ + ++G D+ +
Sbjct: 206 NCPEDALELFLKMERE-NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTL 264
Query: 739 SNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLA-------------------- 620
N ++ Y +CG D A ++F +PERDV SW M++G A
Sbjct: 265 CNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 619 -----------QNGSVEDAVEFFHRMEGESV-KPNDVTMVGVLTACRKKLDLEFGRWIHD 476
QNG ++A+ F+ ++ + KP++VT+V L+AC + ++ G WIH
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384
Query: 475 YIEKNGIKLSLILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEA 296
YI++ GI L+ L ++L+DMYAKCGS++ A +F + E+D+ W+ M+AG
Sbjct: 385 YIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLG------- 437
Query: 295 ARDLFDSMPSKDIAAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACS 116
G K AI +F E+Q +K KP+ VT + L ACS
Sbjct: 438 ------------------------MHGRGKAAIDLFFEMQEAK-VKPNSVTFTNVLCACS 472
Query: 115 ELGAIDMGS-WIHVYIKKEGIKLNCHLATALIDMYSKCG 2
G +D G + H G+ ++D+ + G
Sbjct: 473 HAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAG 511
Score = 130 bits (326), Expect = 8e-28
Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Frame = -3
Query: 1129 KCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSW 950
KC S + +++ +M +F S I ++ + A VF+ +P + +W
Sbjct: 274 KCGSVDDAQKLFDEMPERDVF------SWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAW 327
Query: 949 NVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAI 770
NVLI AY +P + L++F L +P++ T + A A++G + LG IH
Sbjct: 328 NVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIK 387
Query: 769 KEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGSVEDAVE 590
+EG + + + LV YA+CG + A VFYS+ ERDV W++MI GL +G + A++
Sbjct: 388 REGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAID 447
Query: 589 FFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGR-WIHDYIEKNGIKLSLILCNALLDMY 413
F M+ VKPN VT VL AC ++ GR + H+ G+ + ++D+
Sbjct: 448 LFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDIL 507
Query: 412 AKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASL 311
+ G +++A L +EM S L G SL
Sbjct: 508 GRAGFLEEAMELINEMSTTPSASVWGALLGACSL 541
>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
predicted protein [Populus trichocarpa]
Length = 738
Score = 503 bits (1295), Expect = e-140
Identities = 234/379 (61%), Positives = 305/379 (80%)
Frame = -3
Query: 1138 IIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNL 959
+I+KC++ LKQ+HA MLR GLFFDP SA+KL + ALS SSL+YA KVFDQIP PNL
Sbjct: 36 LIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNL 95
Query: 958 YSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHG 779
Y+WN LIRA+A++ +PI L VF ++L+E PN +T+PFVIKA+ ++ L G+ IHG
Sbjct: 96 YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155
Query: 778 MAIKEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGSVED 599
M +K +GSD+F+SN L+HFY+ G D A VF I E+D++SWNSMI+G Q GS E+
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215
Query: 598 AVEFFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKNGIKLSLILCNALLD 419
A++ F RM+ E+ +PN VTMVGVL+AC K++DLEFGRW DYIE+NGI ++LIL NA+LD
Sbjct: 216 ALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLD 275
Query: 418 MYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEAARDLFDSMPSKDIAAWNSL 239
MY KCGS++DA+RLFD+M EKDIVSWTTM+ GYA +GD++AAR +FD MP +DI AWN+L
Sbjct: 276 MYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNAL 335
Query: 238 ISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACSELGAIDMGSWIHVYIKKEG 59
IS+Y+Q+G PKEA+A+F ELQL+K KP+EVTL STL+AC++LGA+D+G WIHVYIKK+G
Sbjct: 336 ISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG 395
Query: 58 IKLNCHLATALIDMYSKCG 2
IKLN H+ T+LIDMYSKCG
Sbjct: 396 IKLNFHITTSLIDMYSKCG 414
Score = 172 bits (436), Expect = 1e-40
Identities = 103/344 (29%), Positives = 171/344 (49%), Gaps = 36/344 (10%)
Frame = -3
Query: 1099 IHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATA 920
IH +++ D F ++ LI S L+ A+ VF +I E ++ SWN +I +
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHF--YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQG 210
Query: 919 SQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKEGYGSDIFV 740
P + L +F R+ E + RPN+ T V+ A AK DL+ G+ + G ++ +
Sbjct: 211 GSPEEALQLFKRMKME-NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLIL 269
Query: 739 SNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLA-------------------- 620
SN ++ Y +CG + A R+F + E+D++SW +MI+G A
Sbjct: 270 SNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329
Query: 619 -----------QNGSVEDAVEFFHRME-GESVKPNDVTMVGVLTACRKKLDLEFGRWIHD 476
QNG ++A+ F ++ ++ KPN+VT+ L AC + ++ G WIH
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHV 389
Query: 475 YIEKNGIKLSLILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEA 296
YI+K GIKL+ + +L+DMY+KCG ++ A +F + +D+ W+ M+AG A G A
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449
Query: 295 ARDLFDSMPSKDI----AAWNSLISAYEQSGNPKEAIAMFNELQ 176
A DLF M + + +L+ A SG E FN+++
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMR 493
Score = 125 bits (313), Expect = 3e-26
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 2/281 (0%)
Frame = -3
Query: 1129 KCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSW 950
KC S +++ +M D S + +I A + + A +VFD +P ++ +W
Sbjct: 279 KCGSLEDARRLFDKMEEK----DIVSWTTMIDGYA--KVGDYDAARRVFDVMPREDITAW 332
Query: 949 NVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAI 770
N LI +Y +P + L++F L + +PN+ T + A A++G + LG IH
Sbjct: 333 NALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIK 392
Query: 769 KEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGSVEDAVE 590
K+G + ++ L+ Y++CG + A VFYS+ RDV W++MI GLA +G A++
Sbjct: 393 KQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAID 452
Query: 589 FFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEK-NGIKLSLILCNALLDMY 413
F +M+ VKPN VT +L AC ++ GR + + G+ ++D+
Sbjct: 453 LFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDIL 512
Query: 412 AKCGSMQDAKRLFDEM-VEKDIVSWTTMLAGYASLGDFEAA 293
+ G +++A L ++M + W +L G+ E A
Sbjct: 513 GRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 499 bits (1284), Expect = e-139
Identities = 236/386 (61%), Positives = 305/386 (79%)
Frame = -3
Query: 1159 AYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFD 980
++ +++I++C++ LK++HA +LR+GLFF P++ASKL +ALS FSSL+YA KVF+
Sbjct: 30 SHSQTLSLIDQCTNLKHLKELHATILRSGLFFHPYNASKLFSVAALSSFSSLDYARKVFE 89
Query: 979 QIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQ 800
+I +PNLY+WN LIRA+A++ +PI L +F R+L + + PNKFT+PFVIKA+A + L
Sbjct: 90 EISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVIKAAAGVASLP 149
Query: 799 LGKGIHGMAIKEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLA 620
+ IHGMAIK GSD+F+ N L+H YA CG D A VF I E+DV+SWNSMI G
Sbjct: 150 FSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVVSWNSMIKGFV 209
Query: 619 QNGSVEDAVEFFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKNGIKLSLI 440
G + A+E F M+ E+V+PNDVTMVGVL+AC KK+DLEFGR + YIE+NGI ++L
Sbjct: 210 LGGCPDKALELFQLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLT 269
Query: 439 LCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEAARDLFDSMPSKD 260
+ NA+LDMY K GS++DA+RLFD+M EKDI SWTTM+ GYA DF+AAR +FD+MP +D
Sbjct: 270 VSNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQD 329
Query: 259 IAAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACSELGAIDMGSWIH 80
I+AWN LISAYEQ G PKEA+A+F+ELQLSKTAKPDEVTLVSTLSAC++LGAID+G WIH
Sbjct: 330 ISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIH 389
Query: 79 VYIKKEGIKLNCHLATALIDMYSKCG 2
VYIKK+ IKLNCHL T+LIDMYSKCG
Sbjct: 390 VYIKKQDIKLNCHLTTSLIDMYSKCG 415
Score = 160 bits (404), Expect = 7e-37
Identities = 103/346 (29%), Positives = 171/346 (49%), Gaps = 36/346 (10%)
Frame = -3
Query: 1099 IHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATA 920
IH ++ L D F + LI A L+ A+ VF +I E ++ SWN +I+ +
Sbjct: 154 IHGMAIKASLGSDLFILNSLIHCYA--SCGDLDSAYSVFVKIEEKDVVSWNSMIKGFVLG 211
Query: 919 SQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKEGYGSDIFV 740
P L +F +L+ + RPN T V+ A AK DL+ G+ + + G ++ V
Sbjct: 212 GCPDKALELF-QLMKAENVRPNDVTMVGVLSACAKKMDLEFGRRVCHYIERNGINVNLTV 270
Query: 739 SNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLA-------------------- 620
SN ++ Y + G + A R+F + E+D+ SW +MI+G A
Sbjct: 271 SNAMLDMYVKNGSLEDARRLFDKMEEKDIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDI 330
Query: 619 -----------QNGSVEDAVEFFHRME-GESVKPNDVTMVGVLTACRKKLDLEFGRWIHD 476
Q+G ++A+ FH ++ ++ KP++VT+V L+AC + ++ G WIH
Sbjct: 331 SAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHV 390
Query: 475 YIEKNGIKLSLILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEA 296
YI+K IKL+ L +L+DMY+KCG ++ A +F + +D+ W+ M+AG A G A
Sbjct: 391 YIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRA 450
Query: 295 ARDLFDSMPSKDI----AAWNSLISAYEQSGNPKEAIAMFNELQLS 170
A DLF M + + +L+ A +G E FN+++ S
Sbjct: 451 AIDLFFEMQETKVRPNAVTFTNLLCACSHTGLVNEGRMFFNQMESS 496
Score = 111 bits (278), Expect = 3e-22
Identities = 63/204 (30%), Positives = 104/204 (50%)
Frame = -3
Query: 1063 DPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTR 884
D FS + +I A + A VFD +P ++ +WNVLI AY +P + L++F
Sbjct: 298 DIFSWTTMIDGYAKRR--DFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHE 355
Query: 883 LLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKEGYGSDIFVSNCLVHFYAECG 704
L +P++ T + A A++G + +G IH K+ + ++ L+ Y++CG
Sbjct: 356 LQLSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCG 415
Query: 703 CSDMACRVFYSIPERDVISWNSMINGLAQNGSVEDAVEFFHRMEGESVKPNDVTMVGVLT 524
+ A +FYS+ RDV W++MI GLA +G A++ F M+ V+PN VT +L
Sbjct: 416 EVEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLC 475
Query: 523 ACRKKLDLEFGRWIHDYIEKNGIK 452
AC + GR + +E + K
Sbjct: 476 ACSHTGLVNEGRMFFNQMESSTFK 499
>ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein
[Arabidopsis thaliana] gi|330253207|gb|AEC08301.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 738
Score = 469 bits (1208), Expect = e-130
Identities = 221/382 (57%), Positives = 292/382 (76%)
Frame = -3
Query: 1147 NITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPE 968
+I++IE+C S QLKQ H M+R G F DP+SASKL +ALS F+SLEYA KVFD+IP+
Sbjct: 33 HISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 967 PNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKG 788
PN ++WN LIRAYA+ P+ + F +++E PNK+T+PF+IKA+A++ L LG+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 787 IHGMAIKEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGS 608
+HGMA+K GSD+FV+N L+H Y CG D AC+VF +I E+DV+SWNSMING Q GS
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 607 VEDAVEFFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKNGIKLSLILCNA 428
+ A+E F +ME E VK + VTMVGVL+AC K +LEFGR + YIE+N + ++L L NA
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 427 LLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGYASLGDFEAARDLFDSMPSKDIAAW 248
+LDMY KCGS++DAKRLFD M EKD V+WTTML GYA D+EAAR++ +SMP KDI AW
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 247 NSLISAYEQSGNPKEAIAMFNELQLSKTAKPDEVTLVSTLSACSELGAIDMGSWIHVYIK 68
N+LISAYEQ+G P EA+ +F+ELQL K K +++TLVSTLSAC+++GA+++G WIH YIK
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 67 KEGIKLNCHLATALIDMYSKCG 2
K GI++N H+ +ALI MYSKCG
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCG 414
Score = 161 bits (407), Expect = 3e-37
Identities = 95/361 (26%), Positives = 185/361 (51%), Gaps = 36/361 (9%)
Frame = -3
Query: 1123 SSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSWNV 944
SS + + +H +++ + D F A+ LI L+ A KVF I E ++ SWN
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVANSLIH--CYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 943 LIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAIKE 764
+I + P L +F ++ +E D + + T V+ A AKI +L+ G+ + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 763 GYGSDIFVSNCLVHFYAECGCSDMACRVF------------------------------- 677
++ ++N ++ Y +CG + A R+F
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 676 YSIPERDVISWNSMINGLAQNGSVEDAVEFFHRME-GESVKPNDVTMVGVLTACRKKLDL 500
S+P++D+++WN++I+ QNG +A+ FH ++ +++K N +T+V L+AC + L
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 499 EFGRWIHDYIEKNGIKLSLILCNALLDMYAKCGSMQDAKRLFDEMVEKDIVSWTTMLAGY 320
E GRWIH YI+K+GI+++ + +AL+ MY+KCG ++ ++ +F+ + ++D+ W+ M+ G
Sbjct: 382 ELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 441
Query: 319 ASLGDFEAARDLFDSMPSKDI----AAWNSLISAYEQSGNPKEAIAMFNELQLSKTAKPD 152
A G A D+F M ++ + ++ A +G EA ++F++++ + P+
Sbjct: 442 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Query: 151 E 149
E
Sbjct: 502 E 502
Score = 126 bits (316), Expect = 1e-26
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 1/256 (0%)
Frame = -3
Query: 1129 KCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSALSEFSSLEYAHKVFDQIPEPNLYSW 950
KC S K++ M D + + ++ A+SE E A +V + +P+ ++ +W
Sbjct: 279 KCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISE--DYEAAREVLNSMPQKDIVAW 332
Query: 949 NVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTYPFVIKASAKIGDLQLGKGIHGMAI 770
N LI AY +P + L VF L + + + N+ T + A A++G L+LG+ IH
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 769 KEGYGSDIFVSNCLVHFYAECGCSDMACRVFYSIPERDVISWNSMINGLAQNGSVEDAVE 590
K G + V++ L+H Y++CG + + VF S+ +RDV W++MI GLA +G +AV+
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 589 FFHRMEGESVKPNDVTMVGVLTACRKKLDLEFGRWIHDYIEKN-GIKLSLILCNALLDMY 413
F++M+ +VKPN VT V AC ++ + +E N GI ++D+
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 412 AKCGSMQDAKRLFDEM 365
+ G ++ A + + M
Sbjct: 513 GRSGYLEKAVKFIEAM 528