BLASTX nr result

ID: Scutellaria22_contig00030463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00030463
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyra...    72   5e-11
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...    72   6e-11
ref|XP_002524006.1| ring finger protein, putative [Ricinus commu...    71   8e-11
gb|AAF01602.1|AC009895_23 unknown protein [Arabidopsis thaliana]       70   1e-10
ref|NP_566208.1| RING-H2 finger protein ATL51 [Arabidopsis thali...    70   1e-10

>ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330234|gb|EFH60653.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
 Frame = +3

Query: 21  GTYNSFKDCSLGICSIYCPQFCYFI-----XXXXXXXXXXXXXXXXXLIIAIIGVLASAF 185
           GTY+S++DCS G+CS+YCPQ+CY I                      L+IA+IG+LASAF
Sbjct: 11  GTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAF 70

Query: 186 LLVSYYTIVT 215
           +LVSYYT+++
Sbjct: 71  ILVSYYTLIS 80


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
 Frame = +3

Query: 9   MGSMGTYN-----SFKDCSLGICSIYCPQFCYFI----XXXXXXXXXXXXXXXXXLIIAI 161
           MGS+G  N     ++KDCSL ICSIYCPQ+CY I                     LIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 162 IGVLASAFLLVSYYTIVT 215
           IG+LASAF+LVSYYTI++
Sbjct: 61  IGILASAFILVSYYTIIS 78


>ref|XP_002524006.1| ring finger protein, putative [Ricinus communis]
           gi|223536733|gb|EEF38374.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
 Frame = +3

Query: 9   MGSMGT------YNSFKDCSLGICSIYCPQFCYFI-------XXXXXXXXXXXXXXXXXL 149
           MGS+G       Y+++KDC+ GICSIYCPQ+CY I                        L
Sbjct: 1   MGSVGNQNPWAPYDTYKDCTQGICSIYCPQWCYIIFPPPPPFNLGGSDDGGDSGTDFSPL 60

Query: 150 IIAIIGVLASAFLLVSYYTIVT 215
           IIAIIG+LASAF+LVSYYTI++
Sbjct: 61  IIAIIGILASAFILVSYYTIIS 82


>gb|AAF01602.1|AC009895_23 unknown protein [Arabidopsis thaliana]
          Length = 291

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
 Frame = +3

Query: 9   MGSMG-------TYNSFKDCSLGICSIYCPQFCYFI-----XXXXXXXXXXXXXXXXXLI 152
           MGS G       TY+S++DCS G+CS+YCPQ+CY I                      L+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 153 IAIIGVLASAFLLVSYYTIVT 215
           IA+IG+LASAF+LVSYYT+++
Sbjct: 61  IALIGILASAFILVSYYTLIS 81


>ref|NP_566208.1| RING-H2 finger protein ATL51 [Arabidopsis thaliana]
           gi|68565340|sp|Q9SRQ8.2|ATL51_ARATH RecName:
           Full=RING-H2 finger protein ATL51
           gi|6091769|gb|AAF03479.1|AC009327_18 unknown protein
           [Arabidopsis thaliana] gi|21553595|gb|AAM62688.1|
           RING-H2 zinc finger protein-like [Arabidopsis thaliana]
           gi|30102646|gb|AAP21241.1| At3g03550 [Arabidopsis
           thaliana] gi|110736072|dbj|BAF00009.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332640435|gb|AEE73956.1| RING-H2 finger protein ATL51
           [Arabidopsis thaliana]
          Length = 356

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
 Frame = +3

Query: 9   MGSMG-------TYNSFKDCSLGICSIYCPQFCYFI-----XXXXXXXXXXXXXXXXXLI 152
           MGS G       TY+S++DCS G+CS+YCPQ+CY I                      L+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 153 IAIIGVLASAFLLVSYYTIVT 215
           IA+IG+LASAF+LVSYYT+++
Sbjct: 61  IALIGILASAFILVSYYTLIS 81


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