BLASTX nr result

ID: Scutellaria22_contig00030428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00030428
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   146   2e-33
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
emb|CBI30660.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29

>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/111 (63%), Positives = 89/111 (80%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHGLVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGNA 182
           +FDELPQRTLSAYNY+I GY+K GLV+ S +LVR L L  ++PD +T+SMILK STSG+ 
Sbjct: 99  MFDELPQRTLSAYNYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTSGDN 158

Query: 183 GLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLML 335
               C +G  VH QI+KS++E DDV+YTALVDSYVKSGR+  AR+VFD+M+
Sbjct: 159 VTLSCNLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMMM 209


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  140 bits (354), Expect = 8e-32
 Identities = 71/111 (63%), Positives = 86/111 (77%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHGLVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGNA 182
           +FDELPQRTLSAYNYMI GY++ GL E+S  +VR L L  E+PD +TFSMILK STSG  
Sbjct: 99  LFDELPQRTLSAYNYMIGGYLRQGLFEESISMVRRLDLDGERPDGFTFSMILKASTSGAN 158

Query: 183 GLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLML 335
            +     G  VHAQI+K D++ DDV+YTALVDSYVKSG++  AR+VFDLML
Sbjct: 159 VMLPRNTGGLVHAQILKLDVKADDVLYTALVDSYVKSGKVGYARKVFDLML 209


>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score =  132 bits (332), Expect = 3e-29
 Identities = 69/110 (62%), Positives = 82/110 (74%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHGLVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGNA 182
           VFD+L  RTLSAYNYMISGY+K   VE+S  LV  L +  EKPD +TFSMILK STSG  
Sbjct: 93  VFDDLRDRTLSAYNYMISGYLKQDQVEESLGLVHRLLVSGEKPDGFTFSMILKASTSGCN 152

Query: 183 GLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLM 332
              L  +GR VH QI+KSDIE D+V+ TAL+DSYVK+GR+  AR VFD+M
Sbjct: 153 VALLGDLGRMVHTQILKSDIERDEVLCTALIDSYVKNGRVAYARTVFDVM 202



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHG-LVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGN 179
           +F +   + + A+N MI GY K      +S ++  ++  LN +P+  TF+ ++   +   
Sbjct: 229 IFLKTMDKDVVAFNAMIEGYSKTSEYAMRSLEVYIDMQRLNFRPNVSTFASVIGACSM-- 286

Query: 180 AGLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLML 335
             L    IG++V +Q++K+    D  + +AL+D Y K GR+  ARRVFD ML
Sbjct: 287 --LAAFEIGQQVQSQLMKTPFYADIKLGSALIDMYAKCGRVVDARRVFDCML 336


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/113 (59%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHGLVEKSFDLVRELYLLNEKPDAYTFSMILK--GSTSG 176
           +FDE+ Q TLSAYNYMISGY+KHG +E+  +LV  L    EKPD +TFSMILK  G  SG
Sbjct: 99  LFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASG 158

Query: 177 NAGLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLML 335
                   +G+ VHAQI++S++E DDV+YTALVDSYVK+G++  ARRVFD+ML
Sbjct: 159 GIFPLTYSLGKVVHAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMML 211



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKH-GLVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGN 179
           +F    ++ +  +N MI GY K      +S ++  ++  LN +P   TF+ ++   +   
Sbjct: 237 IFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGACSV-- 294

Query: 180 AGLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLM 332
             L +  IG++V +Q+VK +   D  + +AL+D Y K GRI+ ARRVFD M
Sbjct: 295 --LTVFEIGQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHM 343


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/113 (59%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKHGLVEKSFDLVRELYLLNEKPDAYTFSMILK--GSTSG 176
           +FDE+ Q TLSAYNYMISGY+KHG +E+  +LV  L    EKPD +TFSMILK  G  SG
Sbjct: 99  LFDEMHQPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASG 158

Query: 177 NAGLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLML 335
                   +G+ VHAQI++S++E DDV+YTALVDSYVK+G++  ARRVFD+ML
Sbjct: 159 GIFPLTYSLGKVVHAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMML 211



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   VFDELPQRTLSAYNYMISGYVKH-GLVEKSFDLVRELYLLNEKPDAYTFSMILKGSTSGN 179
           +F    ++ +  +N MI GY K      +S ++  ++  LN +P   TF+ ++   +   
Sbjct: 237 IFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGACSV-- 294

Query: 180 AGLCLCGIGREVHAQIVKSDIEGDDVIYTALVDSYVKSGRIDCARRVFDLM 332
             L +  IG++V +Q+VK +   D  + +AL+D Y K GRI+ ARRVFD M
Sbjct: 295 --LTVFEIGQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHM 343


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