BLASTX nr result

ID: Scutellaria22_contig00030259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00030259
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM61591.1| putative cell differentiation protein [Arabidopsi...    57   1e-06
ref|XP_002885405.1| hypothetical protein ARALYDRAFT_479606 [Arab...    57   2e-06
ref|NP_188716.1| CCR4-NOT transcription complex subunit 9 [Arabi...    57   2e-06
ref|NP_196802.1| Cell differentiation, Rcd1-like protein [Arabid...    55   5e-06

>gb|AAM61591.1| putative cell differentiation protein [Arabidopsis thaliana]
          Length = 316

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
 Frame = -1

Query: 156 MANLHPSLAMFEL--GSTSSAAN------NKDRNFQSMEQLVLDLCNPDLRENSLLELSK 1
           MANL  SL+M     G ++SA N      NKDRN  S EQLVLDL NP+LREN+LLELSK
Sbjct: 1   MANLPSSLSMSTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60


>ref|XP_002885405.1| hypothetical protein ARALYDRAFT_479606 [Arabidopsis lyrata subsp.
           lyrata] gi|297331245|gb|EFH61664.1| hypothetical protein
           ARALYDRAFT_479606 [Arabidopsis lyrata subsp. lyrata]
          Length = 316

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
 Frame = -1

Query: 156 MANLHPSLAMFEL--GSTSSAAN------NKDRNFQSMEQLVLDLCNPDLRENSLLELSK 1
           MANL  SL+M     G ++SA N      NKDRN  S EQLVLDL NP+LREN+LLELSK
Sbjct: 1   MANLPSSLSMGTPFGGPSTSAQNPSGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60


>ref|NP_188716.1| CCR4-NOT transcription complex subunit 9 [Arabidopsis thaliana]
           gi|20258840|gb|AAM13902.1| putative cell differentiation
           protein [Arabidopsis thaliana]
           gi|21689729|gb|AAM67486.1| putative cell differentiation
           protein [Arabidopsis thaliana]
           gi|332642903|gb|AEE76424.1| CCR4-NOT transcription
           complex subunit 9 [Arabidopsis thaliana]
          Length = 316

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
 Frame = -1

Query: 156 MANLHPSLAMFEL--GSTSSAAN------NKDRNFQSMEQLVLDLCNPDLRENSLLELSK 1
           MANL  SL+M     G ++SA N      NKDRN  S EQLVLDL NP+LREN+LLELSK
Sbjct: 1   MANLPSSLSMGTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60


>ref|NP_196802.1| Cell differentiation, Rcd1-like protein [Arabidopsis thaliana]
           gi|7630054|emb|CAB88262.1| putative protein [Arabidopsis
           thaliana] gi|28628057|gb|AAO25630.1| phytochrome
           interacting molecule 1 [Arabidopsis thaliana]
           gi|332004454|gb|AED91837.1| Cell differentiation,
           Rcd1-like protein [Arabidopsis thaliana]
          Length = 311

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = -1

Query: 156 MANLHPSLAMFELG----STSSAANNKDRNFQSMEQLVLDLCNPDLRENSLLELSK 1
           MANL P L+M  +     S+ S+++N DR   S EQL+LDL NP+LREN+L ELSK
Sbjct: 1   MANLPPPLSMKSVALSGASSPSSSSNNDRKLSSAEQLILDLSNPELRENALHELSK 56


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