BLASTX nr result
ID: Scutellaria22_contig00030217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00030217
(571 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi... 167 8e-50
emb|CBI22241.3| unnamed protein product [Vitis vinifera] 167 8e-50
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi... 166 1e-48
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,... 169 4e-48
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2... 155 4e-44
>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Vitis vinifera]
Length = 1273
Score = 167 bits (423), Expect(3) = 8e-50
Identities = 77/126 (61%), Positives = 101/126 (80%)
Frame = -2
Query: 411 GLWMHTREILVEMNDMGVTPSLSTFRVLLAGFRKARQFDEVKEIVCEMADHNLVKLLSSE 232
GLW H ++IL EM DMG+ P L TFRVLLAG+ KAR+F E K V EM ++ L++L S E
Sbjct: 444 GLWKHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQE 503
Query: 231 DRLTKGFMLLGFSPLAVKIRRDNNKGFSKTEFFDKLGNGLYLDTDLDEYEKRITQVLDDA 52
D L+K FM+L PLA++++RDN+ GFSKTEFFD LGNGLYL+TD+DEYEK++T +L+D+
Sbjct: 504 DPLSKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKVTGILEDS 563
Query: 51 MMPDFN 34
M+PDFN
Sbjct: 564 MVPDFN 569
Score = 53.1 bits (126), Expect(3) = 8e-50
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 566 FCPDERSLGILIGFSCCEGKLKDAFFYISDIMSRGLKP 453
F PDE + GILI + C EGKLK+AF Y+S+I+SR LKP
Sbjct: 391 FSPDEITFGILISWCCREGKLKNAFIYLSEILSRDLKP 428
Score = 23.1 bits (48), Expect(3) = 8e-50
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 448 IYSYNAILSGMFR 410
I SYNAI+SG+F+
Sbjct: 430 ICSYNAIISGVFK 442
>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
Length = 1256
Score = 167 bits (423), Expect(3) = 8e-50
Identities = 77/126 (61%), Positives = 101/126 (80%)
Frame = -2
Query: 411 GLWMHTREILVEMNDMGVTPSLSTFRVLLAGFRKARQFDEVKEIVCEMADHNLVKLLSSE 232
GLW H ++IL EM DMG+ P L TFRVLLAG+ KAR+F E K V EM ++ L++L S E
Sbjct: 427 GLWKHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQE 486
Query: 231 DRLTKGFMLLGFSPLAVKIRRDNNKGFSKTEFFDKLGNGLYLDTDLDEYEKRITQVLDDA 52
D L+K FM+L PLA++++RDN+ GFSKTEFFD LGNGLYL+TD+DEYEK++T +L+D+
Sbjct: 487 DPLSKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGLYLETDVDEYEKKVTGILEDS 546
Query: 51 MMPDFN 34
M+PDFN
Sbjct: 547 MVPDFN 552
Score = 53.1 bits (126), Expect(3) = 8e-50
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -3
Query: 566 FCPDERSLGILIGFSCCEGKLKDAFFYISDIMSRGLKP 453
F PDE + GILI + C EGKLK+AF Y+S+I+SR LKP
Sbjct: 374 FSPDEITFGILISWCCREGKLKNAFIYLSEILSRDLKP 411
Score = 23.1 bits (48), Expect(3) = 8e-50
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 448 IYSYNAILSGMFR 410
I SYNAI+SG+F+
Sbjct: 413 ICSYNAIISGVFK 425
>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Cucumis sativus]
Length = 1246
Score = 166 bits (420), Expect(3) = 1e-48
Identities = 82/137 (59%), Positives = 105/137 (76%)
Frame = -2
Query: 411 GLWMHTREILVEMNDMGVTPSLSTFRVLLAGFRKARQFDEVKEIVCEMADHNLVKLLSSE 232
GLW + + IL EM D G+ P+LSTFR+LLAG+ KARQF+E K+IV EM +KL S +
Sbjct: 415 GLWENAQGILAEMVDQGIEPNLSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVD 474
Query: 231 DRLTKGFMLLGFSPLAVKIRRDNNKGFSKTEFFDKLGNGLYLDTDLDEYEKRITQVLDDA 52
D+L K F LGFS +V+++RDNN G SKTEFFD LGNGLYLDTDLDEYEKR+T+VL+++
Sbjct: 475 DQLCKIFSFLGFSESSVRLKRDNNTGVSKTEFFDTLGNGLYLDTDLDEYEKRLTKVLEES 534
Query: 51 MMPDFNSSIIEKLYSPD 1
++PDFN IIE + D
Sbjct: 535 ILPDFNLFIIEDCKNRD 551
Score = 48.9 bits (115), Expect(3) = 1e-48
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -3
Query: 566 FCPDERSLGILIGFSCCEGKLKDAFFYISDIMSRGLKP 453
F PDE + GILI +SC EG L+ AF Y+S+++S GLKP
Sbjct: 362 FKPDEITFGILICWSCHEGNLRQAFIYMSELLSSGLKP 399
Score = 24.6 bits (52), Expect(3) = 1e-48
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -1
Query: 448 IYSYNAILSGMFR 410
++SYNA++SGMF+
Sbjct: 401 LHSYNALISGMFK 413
>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1204
Score = 169 bits (428), Expect(2) = 4e-48
Identities = 82/131 (62%), Positives = 105/131 (80%)
Frame = -2
Query: 411 GLWMHTREILVEMNDMGVTPSLSTFRVLLAGFRKARQFDEVKEIVCEMADHNLVKLLSSE 232
G+W H R+IL EM +MGVTP+LS FR LLAG+ KARQFDEVK +V EM LVK S E
Sbjct: 365 GMWKHARDILDEMVNMGVTPNLSFFRTLLAGYCKARQFDEVKMMVHEMLKCGLVKSSSLE 424
Query: 231 DRLTKGFMLLGFSPLAVKIRRDNNKGFSKTEFFDKLGNGLYLDTDLDEYEKRITQVLDDA 52
+ L++ FM+LGFSP +V+++RDNN GFSKTEFFD +GNGLYLDT++DEYEK+++ +L D+
Sbjct: 425 NPLSEAFMVLGFSPFSVRLKRDNNVGFSKTEFFDNIGNGLYLDTNIDEYEKKVSGILKDS 484
Query: 51 MMPDFNSSIIE 19
M+PDFN I E
Sbjct: 485 MLPDFNLLIRE 495
Score = 47.8 bits (112), Expect(2) = 4e-48
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -3
Query: 566 FCPDERSLGILIGFSCCEGKLKDAFFYISDIMSRGLKP 453
F PDE + G+L+G+ C E L+ AF Y+S+++SRGL P
Sbjct: 312 FRPDETTFGVLLGWCCIEENLRSAFIYLSEMLSRGLTP 349
>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
predicted protein [Populus trichocarpa]
Length = 1158
Score = 155 bits (392), Expect(2) = 4e-44
Identities = 71/126 (56%), Positives = 99/126 (78%)
Frame = -2
Query: 411 GLWMHTREILVEMNDMGVTPSLSTFRVLLAGFRKARQFDEVKEIVCEMADHNLVKLLSSE 232
G+W H ++IL EM DMG P LSTF++LLAG+ +AR+FDEVK ++ EM + L++ + E
Sbjct: 329 GMWEHAQDILDEMVDMGTAPVLSTFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALE 388
Query: 231 DRLTKGFMLLGFSPLAVKIRRDNNKGFSKTEFFDKLGNGLYLDTDLDEYEKRITQVLDDA 52
D L+K FM+L L+V+++RDN+ FSKTEFFD LGNGLYLDTDLDEY+KR+ +L+D+
Sbjct: 389 DPLSKAFMVLELKTLSVRLKRDNDVEFSKTEFFDNLGNGLYLDTDLDEYDKRVAGILEDS 448
Query: 51 MMPDFN 34
M+PDF+
Sbjct: 449 MVPDFD 454
Score = 48.1 bits (113), Expect(2) = 4e-44
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = -3
Query: 566 FCPDERSLGILIGFSCCEGKLKDAFFYISDIMSRGLKPHDILLQCY 429
F PDE + GILI + C E KL AF Y+S+++SRGLKP+ + CY
Sbjct: 276 FMPDEVTFGILICWCCRERKLSGAFNYLSELLSRGLKPN---IWCY 318