BLASTX nr result

ID: Scutellaria22_contig00029903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029903
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]              302   2e-80
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   302   2e-80
gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]        294   7e-78
ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis...   294   7e-78
ref|XP_002885651.1| hypothetical protein ARALYDRAFT_479958 [Arab...   294   7e-78

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  302 bits (773), Expect = 2e-80
 Identities = 147/181 (81%), Positives = 170/181 (93%), Gaps = 2/181 (1%)
 Frame = -2

Query: 540 FFKVGKFYELYELDAETGHKELDWKITLSGVGKCRQVGVSESGIDDAVQKLIARGYKVGR 361
           FFKVGKFYELYELDAE GHKELDWK+T SGVGKCRQVG+SESGID+AVQKLIARGYKVGR
Sbjct: 297 FFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGR 356

Query: 360 MEQLETSAQAKSRGATSVIKRKLINVLTPATTSEGNIGPDAVHLLAIKE--VLLENGSTV 187
           MEQLETS QAK+RG+TSVI+RKL++V+TP+T  +GNIGPDAVHLL++KE   +LENGS +
Sbjct: 357 MEQLETSEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVI 416

Query: 186 FGFAFVDSAALKFWVGSISDDASCAALGALLMQVSPKEIIYENQGLSKDAQRAIKKFSLT 7
           +GFAFVD AALKFW+GSISDDASCAALGALLMQVSPKE+IYENQ LSK+AQ+A+KK+SL+
Sbjct: 417 YGFAFVDCAALKFWIGSISDDASCAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLS 476

Query: 6   G 4
           G
Sbjct: 477 G 477


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  302 bits (773), Expect = 2e-80
 Identities = 147/181 (81%), Positives = 170/181 (93%), Gaps = 2/181 (1%)
 Frame = -2

Query: 540 FFKVGKFYELYELDAETGHKELDWKITLSGVGKCRQVGVSESGIDDAVQKLIARGYKVGR 361
           FFKVGKFYELYELDAE GHKELDWK+T SGVGKCRQVG+SESGID+AVQKLIARGYKVGR
Sbjct: 295 FFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGR 354

Query: 360 MEQLETSAQAKSRGATSVIKRKLINVLTPATTSEGNIGPDAVHLLAIKE--VLLENGSTV 187
           MEQLETS QAK+RG+TSVI+RKL++V+TP+T  +GNIGPDAVHLL++KE   +LENGS +
Sbjct: 355 MEQLETSEQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVI 414

Query: 186 FGFAFVDSAALKFWVGSISDDASCAALGALLMQVSPKEIIYENQGLSKDAQRAIKKFSLT 7
           +GFAFVD AALKFW+GSISDDASCAALGALLMQVSPKE+IYENQ LSK+AQ+A+KK+SL+
Sbjct: 415 YGFAFVDCAALKFWIGSISDDASCAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLS 474

Query: 6   G 4
           G
Sbjct: 475 G 475


>gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]
          Length = 1109

 Score =  294 bits (752), Expect = 7e-78
 Identities = 142/181 (78%), Positives = 169/181 (93%), Gaps = 2/181 (1%)
 Frame = -2

Query: 540 FFKVGKFYELYELDAETGHKELDWKITLSGVGKCRQVGVSESGIDDAVQKLIARGYKVGR 361
           FFKVGKFYELYELDAE GHKELDWK+T+SGVGKCRQVG+SESGID+AVQKL+ARGYKVGR
Sbjct: 287 FFKVGKFYELYELDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGR 346

Query: 360 MEQLETSAQAKSRGATSVIKRKLINVLTPATTSEGNIGPDAVHLLAIKEVLLE--NGSTV 187
           +EQLETS QAK+RGA ++I RKL+ VLTP+T SEGNIGPDAVHLLAIKE+ +E    STV
Sbjct: 347 IEQLETSDQAKARGANTIIPRKLVQVLTPSTASEGNIGPDAVHLLAIKEIKMELQKCSTV 406

Query: 186 FGFAFVDSAALKFWVGSISDDASCAALGALLMQVSPKEIIYENQGLSKDAQRAIKKFSLT 7
           +GFAFVD AAL+FWVGSISDDASCAALGALLMQVSPKE++Y+++GLS++AQ+A++K++LT
Sbjct: 407 YGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLT 466

Query: 6   G 4
           G
Sbjct: 467 G 467


>ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
           gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA
           mismatch repair protein MSH7; Short=AtMSH7; AltName:
           Full=MutS protein homolog 7 gi|3757550|emb|CAA07685.1|
           Msh6-2 protein [Arabidopsis thaliana]
           gi|9294039|dbj|BAB01996.1| DNA repair protein MutS
           [Arabidopsis thaliana] gi|332643383|gb|AEE76904.1| DNA
           mismatch repair protein Msh6-2 [Arabidopsis thaliana]
          Length = 1109

 Score =  294 bits (752), Expect = 7e-78
 Identities = 142/181 (78%), Positives = 169/181 (93%), Gaps = 2/181 (1%)
 Frame = -2

Query: 540 FFKVGKFYELYELDAETGHKELDWKITLSGVGKCRQVGVSESGIDDAVQKLIARGYKVGR 361
           FFKVGKFYELYELDAE GHKELDWK+T+SGVGKCRQVG+SESGID+AVQKL+ARGYKVGR
Sbjct: 287 FFKVGKFYELYELDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGR 346

Query: 360 MEQLETSAQAKSRGATSVIKRKLINVLTPATTSEGNIGPDAVHLLAIKEVLLE--NGSTV 187
           +EQLETS QAK+RGA ++I RKL+ VLTP+T SEGNIGPDAVHLLAIKE+ +E    STV
Sbjct: 347 IEQLETSDQAKARGANTIIPRKLVQVLTPSTASEGNIGPDAVHLLAIKEIKMELQKCSTV 406

Query: 186 FGFAFVDSAALKFWVGSISDDASCAALGALLMQVSPKEIIYENQGLSKDAQRAIKKFSLT 7
           +GFAFVD AAL+FWVGSISDDASCAALGALLMQVSPKE++Y+++GLS++AQ+A++K++LT
Sbjct: 407 YGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLT 466

Query: 6   G 4
           G
Sbjct: 467 G 467


>ref|XP_002885651.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
           lyrata] gi|297331491|gb|EFH61910.1| hypothetical protein
           ARALYDRAFT_479958 [Arabidopsis lyrata subsp. lyrata]
          Length = 1119

 Score =  294 bits (752), Expect = 7e-78
 Identities = 142/181 (78%), Positives = 169/181 (93%), Gaps = 2/181 (1%)
 Frame = -2

Query: 540 FFKVGKFYELYELDAETGHKELDWKITLSGVGKCRQVGVSESGIDDAVQKLIARGYKVGR 361
           FFKVGKFYELYE+DAE GHKELDWK+T+SGVGKCRQVG+SESGID+AVQKL+ARGYKVGR
Sbjct: 281 FFKVGKFYELYEVDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGR 340

Query: 360 MEQLETSAQAKSRGATSVIKRKLINVLTPATTSEGNIGPDAVHLLAIKEVL--LENGSTV 187
           +EQLETS QAK+RGA ++I RKL+ VLTP+T SEGNIGPDAVHLLAIKE+   LE  STV
Sbjct: 341 IEQLETSDQAKARGANTIIPRKLVQVLTPSTASEGNIGPDAVHLLAIKEIKMELEKCSTV 400

Query: 186 FGFAFVDSAALKFWVGSISDDASCAALGALLMQVSPKEIIYENQGLSKDAQRAIKKFSLT 7
           +GFAFVD AAL+FWVGSISDDASCAALGALLMQVSPKE++Y+++GLS++AQ+A++K++LT
Sbjct: 401 YGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVVYDSKGLSREAQKALRKYTLT 460

Query: 6   G 4
           G
Sbjct: 461 G 461


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