BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029620
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   174   9e-42
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     136   2e-30
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   135   4e-30
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              133   2e-29
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   133   2e-29

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  174 bits (440), Expect = 9e-42
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = -2

Query: 304 FPMKKKDEVLEIFLKWKTEVENQTGRKIKVLRTDSGGEYKNDPFQKICQEYGIVRHFTVR 125
           F MK K++VLEIFLKWK EVENQTGRKIKVLRTD+GGEYK+DPF K+CQ+ GI+RHFT+R
Sbjct: 506 FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIR 565

Query: 124 GTPQQNGVSERMNRTLVEKVRCMLSNAGLDRKFWAEAVKYA 2
            TPQQNGVSERMN+ LVEKVRCMLSNA L RKFWAEAV YA
Sbjct: 566 KTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYA 606


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/105 (60%), Positives = 82/105 (78%)
 Frame = -2

Query: 316 RVWVFPMKKKDEVLEIFLKWKTEVENQTGRKIKVLRTDSGGEYKNDPFQKICQEYGIVRH 137
           +VW+F MK K+EV   F +WK EV NQTGRKIK LR+D+GGEY++  F ++C++ GI RH
Sbjct: 485 KVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQLCKDEGITRH 544

Query: 136 FTVRGTPQQNGVSERMNRTLVEKVRCMLSNAGLDRKFWAEAVKYA 2
           FTV+ +PQQNGV+ERMNRTL+EK R M  +AGL  +FWAEA  +A
Sbjct: 545 FTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLPEEFWAEAANHA 589


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  135 bits (340), Expect = 4e-30
 Identities = 64/103 (62%), Positives = 79/103 (76%)
 Frame = -2

Query: 310 WVFPMKKKDEVLEIFLKWKTEVENQTGRKIKVLRTDSGGEYKNDPFQKICQEYGIVRHFT 131
           WV+ MK K E  + F +WK  +ENQTG+KIK LRTD+G E+    F + C++ GI RH T
Sbjct: 504 WVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRT 563

Query: 130 VRGTPQQNGVSERMNRTLVEKVRCMLSNAGLDRKFWAEAVKYA 2
           VR TPQQNGV+ERMN+TL+E+ RCMLSNAGLDR+FWAEAV  A
Sbjct: 564 VRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTA 606


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/105 (58%), Positives = 80/105 (76%)
 Frame = -2

Query: 316 RVWVFPMKKKDEVLEIFLKWKTEVENQTGRKIKVLRTDSGGEYKNDPFQKICQEYGIVRH 137
           R+WV+P+KKK +V  +F  +K ++E +TG+KIK LRTD+GGEY +  F   C++ GIVR 
Sbjct: 513 RLWVYPIKKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQ 572

Query: 136 FTVRGTPQQNGVSERMNRTLVEKVRCMLSNAGLDRKFWAEAVKYA 2
           FTV  TPQQNGV+ERMNRTL+E+ R ML  AG+ + FWAEAVK A
Sbjct: 573 FTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTA 617


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/105 (57%), Positives = 82/105 (78%)
 Frame = -2

Query: 316 RVWVFPMKKKDEVLEIFLKWKTEVENQTGRKIKVLRTDSGGEYKNDPFQKICQEYGIVRH 137
           +VW++ ++KKDE  E F++WK  VENQ+ RK+K LRTD+G EY N  F+K C+E GIVRH
Sbjct: 506 KVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRH 565

Query: 136 FTVRGTPQQNGVSERMNRTLVEKVRCMLSNAGLDRKFWAEAVKYA 2
            T   TPQQNG++ER+NRT+++KVR MLS +G+++KFWAEA   A
Sbjct: 566 KTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTA 610