BLASTX nr result

ID: Scutellaria22_contig00029475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029475
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...    62   6e-08
ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis tha...    55   5e-06
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...    55   6e-06

>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
 Frame = -2

Query: 286 FLSVLRAIRLGVKNTSMAXXXXXXXXXXXXXXXXXXXXXXXK-----NRVEDRDDMEIEG 122
           FLS+LR+IR   KN  M                        +     +RV + DD +   
Sbjct: 113 FLSLLRSIRQCFKNRKMGPPRFGESSRGSYAAAYRKRKGGGRARGVRSRVREVDDGD-GS 171

Query: 121 EERGYDVKDLFCLLEKLEMVMGLVHLDRFPDCLKGLVQTV 2
           EE  +DV+ LF +LE+L++V+GL+HLDRFPD LK LVQTV
Sbjct: 172 EESEFDVRMLFSVLERLQLVLGLIHLDRFPDSLKSLVQTV 211


>ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis thaliana]
           gi|5281022|emb|CAB45995.1| hypothetical protein
           [Arabidopsis thaliana] gi|7268337|emb|CAB78631.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332658263|gb|AEE83663.1| condensin-2 complex subunit
           D3 [Arabidopsis thaliana]
          Length = 1314

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -2

Query: 127 EGEERGYDVKDLFCLLEKLEMVMGLVHLDRFPDCLKGLVQTV 2
           E EE G+D K +F +LEKL  V+  VHLDRFPD LK LVQTV
Sbjct: 149 ETEEGGFDAKLMFIVLEKLGSVLSFVHLDRFPDSLKSLVQTV 190


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1315

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -2

Query: 127 EGEERGYDVKDLFCLLEKLEMVMGLVHLDRFPDCLKGLVQTV 2
           E EE G+D K +F +LEKL  V+  VHLDRFPD LK LVQTV
Sbjct: 150 ETEEGGFDAKLVFIVLEKLGSVLNFVHLDRFPDSLKSLVQTV 191


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