BLASTX nr result

ID: Scutellaria22_contig00029424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029424
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
emb|CBI19924.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...    78   7e-13

>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = -3

Query: 203 NVSWNVIVRRYLEMGLGNEAVNMFSKMIRMKIMPMSFTVSNAILACSSFGGLKECLQIHG 24
           NV+WN+IVRRYLE+G  NEAV MF KM R K+ P+S+T SNA++ACS    +KE +QIHG
Sbjct: 224 NVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHG 283

Query: 23  FGIKIN 6
              KIN
Sbjct: 284 VATKIN 289


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/64 (64%), Positives = 49/64 (76%)
 Frame = -3

Query: 200 VSWNVIVRRYLEMGLGNEAVNMFSKMIRMKIMPMSFTVSNAILACSSFGGLKECLQIHGF 21
           +SWNVIVRRYLEMG   EAV MF KMIR  I P++FT SNA++ACSS   L+E +QIHG 
Sbjct: 228 ISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGV 287

Query: 20  GIKI 9
            I+I
Sbjct: 288 AIRI 291


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/64 (64%), Positives = 49/64 (76%)
 Frame = -3

Query: 200 VSWNVIVRRYLEMGLGNEAVNMFSKMIRMKIMPMSFTVSNAILACSSFGGLKECLQIHGF 21
           +SWNVIVRRYLEMG   EAV MF KMIR  I P++FT SNA++ACSS   L+E +QIHG 
Sbjct: 228 ISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGV 287

Query: 20  GIKI 9
            I+I
Sbjct: 288 AIRI 291


>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/67 (58%), Positives = 49/67 (73%)
 Frame = -3

Query: 203 NVSWNVIVRRYLEMGLGNEAVNMFSKMIRMKIMPMSFTVSNAILACSSFGGLKECLQIHG 24
           +VSWNVIVRRYLE+G G EAV+MF +M R  +MP SFT SNA++ACS    L E  QIHG
Sbjct: 226 DVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHG 285

Query: 23  FGIKINM 3
             +K+ +
Sbjct: 286 IVVKVGL 292


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/65 (55%), Positives = 48/65 (73%)
 Frame = -3

Query: 203 NVSWNVIVRRYLEMGLGNEAVNMFSKMIRMKIMPMSFTVSNAILACSSFGGLKECLQIHG 24
           +V+WNVIVRRYL++G   EAV MF KM +  + P++FT SNA++ACS+   L E +QIH 
Sbjct: 224 DVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHA 283

Query: 23  FGIKI 9
           F IKI
Sbjct: 284 FAIKI 288


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