BLASTX nr result

ID: Scutellaria22_contig00029275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029275
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16479.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virg...   113   2e-23
ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata] gi...   110   9e-23

>emb|CBI16479.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 7/120 (5%)
 Frame = -2

Query: 346 FFKKMVNTYKIMPTMEHYGCMVDLFGRAGKIEEAYQIIESMPMEPNSVILRSYLSACKHH 167
           FF +MV  Y I PTMEHYGCMVD+F RAG IEEAY+II++MPMEPNSVILRS++ AC++ 
Sbjct: 234 FFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRND 293

Query: 166 GLACYVDECLMQLLIDLEPDVGSNYVLAASVSSSTGYWN-------GMKTRGLRKVPGHS 8
           G     DE L +LL+++EPD+G+NYVLA+ VSS +G WN        MK +GL+KVPG S
Sbjct: 294 GRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWS 353


>ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Vitis vinifera]
          Length = 461

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 7/120 (5%)
 Frame = -2

Query: 346 FFKKMVNTYKIMPTMEHYGCMVDLFGRAGKIEEAYQIIESMPMEPNSVILRSYLSACKHH 167
           FF +MV  Y I PTMEHYGCMVD+F RAG IEEAY+II++MPMEPNSVILRS++ AC++ 
Sbjct: 324 FFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRND 383

Query: 166 GLACYVDECLMQLLIDLEPDVGSNYVLAASVSSSTGYWN-------GMKTRGLRKVPGHS 8
           G     DE L +LL+++EPD+G+NYVLA+ VSS +G WN        MK +GL+KVPG S
Sbjct: 384 GRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWS 443


>ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 444

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
 Frame = -2

Query: 346 FFKKMVNTYKIMPTMEHYGCMVDLFGRAGKIEEAYQIIESMPMEPNSVILRSYLSACKHH 167
           +F +MV  Y I P++EHYGCMVDL GRAG I+EAY II+ MPMEPN VILRS+L AC++H
Sbjct: 322 YFDRMVRVYGIKPSVEHYGCMVDLLGRAGFIQEAYDIIKGMPMEPNDVILRSFLGACRNH 381

Query: 166 GLACYVDECLMQLLIDLEPDVGSNYVLAASVSSSTGYWN-------GMKTRGLRKVPGHS 8
           G    +D+     L +LE ++G+NYVL A+V S+   W         MK +GL+KVPG S
Sbjct: 382 GWVPSLDD---DFLSELESELGANYVLTANVFSTCASWKDANDLRVAMKLKGLKKVPGCS 438

Query: 7   W 5
           W
Sbjct: 439 W 439


>gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
          Length = 485

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/120 (43%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
 Frame = -2

Query: 346 FFKKMVNTYKIMPTMEHYGCMVDLFGRAGKIEEAYQIIESMPMEPNSVILRSYLSACKHH 167
           +F+ M + Y+I P +EHYGC+VDL+ RAG++E+A+ ++ESMPM+PN V++ S L+AC++H
Sbjct: 314 YFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNH 373

Query: 166 GLACYVDECLMQLLIDLEPDVGSNYVLAASVSSSTGYWNG-------MKTRGLRKVPGHS 8
           G    + E LM+ + DL+    SNYV+ +++ ++ G W G       MK  GL+K PG+S
Sbjct: 374 GNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 433


>ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
           gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 500

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/120 (43%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
 Frame = -2

Query: 346 FFKKMVNTYKIMPTMEHYGCMVDLFGRAGKIEEAYQIIESMPMEPNSVILRSYLSACKHH 167
           +F+ M++ Y+I P +EHYGC+VDL+ RAG++E+A ++++SMPM+PN V++ S L+AC++H
Sbjct: 329 YFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNH 388

Query: 166 GLACYVDECLMQLLIDLEPDVGSNYVLAASVSSSTGYWNG-------MKTRGLRKVPGHS 8
           G    + E LM+ L DL     SNYV+ +++ ++ G W G       MK  GL+K PG S
Sbjct: 389 GNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448


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