BLASTX nr result

ID: Scutellaria22_contig00029259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029259
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18125.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002323604.1| GRAS family transcription factor [Populus tr...   129   3e-28
ref|XP_002526659.1| transcription factor, putative [Ricinus comm...   127   1e-27
gb|ABD72961.1| GRAS5 [Solanum lycopersicum]                           126   2e-27
ref|XP_002299999.1| GRAS family transcription factor [Populus tr...   123   1e-26

>emb|CBI18125.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/115 (52%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   ENGEKGLAGEIVRSIKEKSSPLGDTMERVAYNLFQSRESQGEDIRNEAKKNLAEAFMVVY 182
           E  ++ L+  I+RSI EK +PLG+T+ER+A+NLF+  E Q + ++ E+ +N A AF   Y
Sbjct: 265 EENQRELSEVILRSICEKGNPLGETLERLAFNLFEDIERQDDYLKQESMQNFAAAFKAFY 324

Query: 183 QSLPNGKFAHFTANSAILESMPKDAEMIRVVDFDMGEGIQWPPLIEALSRKQTAL 347
           Q  P G+FAHF ANSAILE+MP D E + +VDFDMGEG+QWPP+IEA+ ++  A+
Sbjct: 325 QIFPYGRFAHFAANSAILEAMPGDVETVHIVDFDMGEGVQWPPMIEAIGKQHKAV 379


>ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222868234|gb|EEF05365.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 535

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/115 (53%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   ENGEKGLAGEIVRSIKEKSSPLGDTMERVAYNLFQSRESQGEDIRNEAKKNLAEAFMVVY 182
           + G+  LA  I+R + EK SP G+  E +A+NL Q  E QG+ I+ E+ +N   AF   Y
Sbjct: 174 DGGQSELADVIMRCVSEKVSPAGEAFECLAFNLCQDLEKQGDYIKRESCRNFEAAFRAFY 233

Query: 183 QSLPNGKFAHFTANSAILESMPKDAEMIRVVDFDMGEGIQWPPLIEALSRKQTAL 347
           Q  P G+FAHF ANSAILE++P DAE I +VDFD+GEGIQWPPLIEAL+ +Q A+
Sbjct: 234 QIFPYGRFAHFAANSAILEAIPADAETIHIVDFDLGEGIQWPPLIEALAHQQKAV 288


>ref|XP_002526659.1| transcription factor, putative [Ricinus communis]
           gi|223533959|gb|EEF35681.1| transcription factor,
           putative [Ricinus communis]
          Length = 509

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/112 (51%), Positives = 79/112 (70%)
 Frame = +3

Query: 3   ENGEKGLAGEIVRSIKEKSSPLGDTMERVAYNLFQSRESQGEDIRNEAKKNLAEAFMVVY 182
           EN +  LAG ++R ++EK S  G+ + R+A++L Q  E  G+ ++ E+  N   AF   Y
Sbjct: 148 ENQKTELAGVLIRCLREKVSLAGEPLLRIAFSLSQDTEKHGDYLKQESSNNFEAAFRAFY 207

Query: 183 QSLPNGKFAHFTANSAILESMPKDAEMIRVVDFDMGEGIQWPPLIEALSRKQ 338
           Q  PNG+ AHF ANSAILE+MP DAEMI +VDFDMGEG+QWPP++E L+R Q
Sbjct: 208 QIFPNGRIAHFAANSAILEAMPADAEMIHIVDFDMGEGVQWPPMLETLARLQ 259


>gb|ABD72961.1| GRAS5 [Solanum lycopersicum]
          Length = 301

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/117 (51%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
 Frame = +3

Query: 3   ENGEKGLAGEIVRSIKEKSSPLGDTMERVAYNLFQSRESQGED--IRNEAKKNLAEAFMV 176
           ENG K LA  I+R IK K +PLG+++ERVA NLFQ  E + ++  ++ E+ K +  AF  
Sbjct: 27  ENGHKELAEVIIRCIKGKINPLGESLERVASNLFQHTEEEDQESYLKQESNKIIEAAFKA 86

Query: 177 VYQSLPNGKFAHFTANSAILESMPKDAEMIRVVDFDMGEGIQWPPLIEALSRKQTAL 347
            YQ  P GKFAHF ANSAI+E+MP +++ I ++D+DMG+GIQWPP+I+A+S+K+  L
Sbjct: 87  FYQIFPLGKFAHFAANSAIIEAMPDESQTIHIIDYDMGKGIQWPPIIKAMSQKRKIL 143


>ref|XP_002299999.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847257|gb|EEE84804.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 432

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/106 (51%), Positives = 79/106 (74%)
 Frame = +3

Query: 15  KGLAGEIVRSIKEKSSPLGDTMERVAYNLFQSRESQGEDIRNEAKKNLAEAFMVVYQSLP 194
           K LAG+I+  +KEK+ P G T+ER+AY + Q+ E + + +  EA KN   AF   YQ  P
Sbjct: 171 KELAGKIMSQLKEKACPFGSTVERLAYYMIQALEGEVDFLWKEASKNYEAAFKTFYQIFP 230

Query: 195 NGKFAHFTANSAILESMPKDAEMIRVVDFDMGEGIQWPPLIEALSR 332
            G+FAHFTANS ILE++P+DA+++ +VDFD+G+G+QWPP+IE L+R
Sbjct: 231 YGRFAHFTANSVILEALPEDADIVHIVDFDVGQGVQWPPMIEDLAR 276


Top