BLASTX nr result

ID: Scutellaria22_contig00029136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029136
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_002513633.1| pentatricopeptide repeat-containing protein,...   106   2e-21
ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...   100   9e-20

>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
           gi|302143764|emb|CBI22625.3| unnamed protein product
           [Vitis vinifera]
          Length = 880

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = +3

Query: 3   QLSHYNLLVDLLGKAGRLEEAVTMLKSSPFSPNASIYKRLLHACKLHQNVLLAEEMVRQG 182
           QL HY  LVDLLG+AGRLEEA+ ++++ PF P+A IYK LL ACKLH N+ L E M RQG
Sbjct: 656 QLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQG 715

Query: 183 LEIDPSDLEFYDLLATIYDEAGRYDLGDNMRSLARK 290
           LE+DPSD  FY LLA +YD++GR +LG+  R + R+
Sbjct: 716 LELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRE 751


>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/102 (52%), Positives = 70/102 (68%)
 Frame = +3

Query: 3   QLSHYNLLVDLLGKAGRLEEAVTMLKSSPFSPNASIYKRLLHACKLHQNVLLAEEMVRQG 182
           +L HY  LVDLLG+ GRLEEA+ ++++ PF P++ IYK LL+AC LH NV L E+M R+ 
Sbjct: 659 KLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRC 718

Query: 183 LEIDPSDLEFYDLLATIYDEAGRYDLGDNMRSLARKNLLSSS 308
           LE+DP D   Y LLA++YD AG  D GD  R L R+  L  S
Sbjct: 719 LELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRS 760


>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/105 (48%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   QLSHYNLLVDLLGKAGRLEEAVTMLKSSPFSPNASIYKRLLHACKLHQNVLLAEEMVRQG 182
           Q  HY  LVD+LG+AGRLEEA+ ++++ P  P+ASIYK LL AC +H+N+ L E++ R+G
Sbjct: 660 QSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRG 719

Query: 183 LEIDPSDLEFYDLLATIYDEAGRYDLGD-NMRSLARKNLLSSSKV 314
           LE++P D  F+ LL  +YD+ GRYDLG+   RS+ +K   +  +V
Sbjct: 720 LELNPLDPAFHLLLVKLYDDCGRYDLGEKTRRSIKQKGWTAMGRV 764


>ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|222848907|gb|EEE86454.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = +3

Query: 3   QLSHYNLLVDLLGKAGRLEEAVTMLKSSPFSPNASIYKRLLHACKLHQNVLLAEEMVRQG 182
           QL HY  L DLLG+AGRLEEA+ +L++ P  PNASIYK LL ACK+H+ V L E++  +G
Sbjct: 581 QLDHYVCLFDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRG 640

Query: 183 LEIDPSDLEFYDLLATIYDEAGRYDLGDNMRSLAR 287
           L++DPSD  F  +LA +YD +GR DL   +R   R
Sbjct: 641 LKLDPSDPAFNLMLANLYDSSGRPDLAATIRRSVR 675


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481230|gb|AES62433.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/102 (50%), Positives = 67/102 (65%)
 Frame = +3

Query: 3   QLSHYNLLVDLLGKAGRLEEAVTMLKSSPFSPNASIYKRLLHACKLHQNVLLAEEMVRQG 182
           +L HY  LVDLLG+ GRLEEA+ +++   F P++ I K LL+AC LH NV L E+M R+ 
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRC 716

Query: 183 LEIDPSDLEFYDLLATIYDEAGRYDLGDNMRSLARKNLLSSS 308
           LE+DPSD   Y LLA +YD AG  D G+  R L R+  L  S
Sbjct: 717 LELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRS 758


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