BLASTX nr result

ID: Scutellaria22_contig00029049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00029049
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27634.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...    55   6e-06

>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 2   GCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 109
           GC+PNHVTDTTLDFL KEIEK RY+KASI+R++ DD
Sbjct: 318 GCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDD 353


>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 2   GCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 109
           GC+PNHVTDTTLDFL KEIEK RY+KASI+R++ DD
Sbjct: 755 GCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDD 790


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = +2

Query: 2   GCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMD 106
           GC PNHVTDTTLDFL KEIEK RYQKASIMR   D
Sbjct: 604 GCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 638


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +2

Query: 2   GCAPNHVTDTTLDFLEKEIEKRRYQKASIMR 94
           GC+PNHVTDTTLDFL +E+EK RY+KASI+R
Sbjct: 768 GCSPNHVTDTTLDFLGREMEKARYEKASIIR 798


>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496560|gb|AES77763.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 791

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 2   GCAPNHVTDTTLDFLEKEIEKRRYQKASIMRSNMDD 109
           GC PNHVTDTTLD+L +EI+K RYQKASI+ S  DD
Sbjct: 755 GCTPNHVTDTTLDYLVREIDKLRYQKASIL-SKKDD 789


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